Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIST3H2BBQ8N257 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
HIST3H2BBQ8N257 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.43■□□□□ 0.38
HIST3H2BBQ8N257 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2BBQ8N257 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.43■□□□□ 0.38
HIST3H2BBQ8N257 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2BBQ8N257 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2BBQ8N257 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2BBQ8N257 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST3H2BBQ8N257 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HIST3H2BBQ8N257 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.43■□□□□ 0.38
HIST3H2BBQ8N257 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2BBQ8N257 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2BBQ8N257 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2BBQ8N257 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2BBQ8N257 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2BBQ8N257 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.42■□□□□ 0.38
HIST3H2BBQ8N257 AC007952.6-201ENST00000573168 2673 ntBASIC17.42■□□□□ 0.38
HIST3H2BBQ8N257 AC003957.1-201ENST00000625108 2673 ntBASIC17.42■□□□□ 0.38
HIST3H2BBQ8N257 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST3H2BBQ8N257 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST3H2BBQ8N257 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST3H2BBQ8N257 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HIST3H2BBQ8N257 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.4■□□□□ 0.38
HIST3H2BBQ8N257 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HIST3H2BBQ8N257 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST3H2BBQ8N257 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST3H2BBQ8N257 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST3H2BBQ8N257 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC17.4■□□□□ 0.38
HIST3H2BBQ8N257 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HIST3H2BBQ8N257 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIST3H2BBQ8N257 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HIST3H2BBQ8N257 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.4■□□□□ 0.38
HIST3H2BBQ8N257 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
HIST3H2BBQ8N257 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.39■□□□□ 0.38
HIST3H2BBQ8N257 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIST3H2BBQ8N257 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST3H2BBQ8N257 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIST3H2BBQ8N257 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST3H2BBQ8N257 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST3H2BBQ8N257 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HIST3H2BBQ8N257 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST3H2BBQ8N257 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
HIST3H2BBQ8N257 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST3H2BBQ8N257 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST3H2BBQ8N257 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
HIST3H2BBQ8N257 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HIST3H2BBQ8N257 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST3H2BBQ8N257 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST3H2BBQ8N257 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST3H2BBQ8N257 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST3H2BBQ8N257 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST3H2BBQ8N257 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST3H2BBQ8N257 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST3H2BBQ8N257 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST3H2BBQ8N257 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST3H2BBQ8N257 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST3H2BBQ8N257 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HIST3H2BBQ8N257 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST3H2BBQ8N257 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST3H2BBQ8N257 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST3H2BBQ8N257 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST3H2BBQ8N257 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST3H2BBQ8N257 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST3H2BBQ8N257 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST3H2BBQ8N257 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST3H2BBQ8N257 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.36■□□□□ 0.37
HIST3H2BBQ8N257 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST3H2BBQ8N257 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST3H2BBQ8N257 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.36■□□□□ 0.37
HIST3H2BBQ8N257 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
HIST3H2BBQ8N257 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST3H2BBQ8N257 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST3H2BBQ8N257 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST3H2BBQ8N257 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST3H2BBQ8N257 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST3H2BBQ8N257 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.35■□□□□ 0.37
HIST3H2BBQ8N257 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST3H2BBQ8N257 SLC6A10P-202ENST00000431994 2058 ntBASIC17.35■□□□□ 0.37
HIST3H2BBQ8N257 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST3H2BBQ8N257 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST3H2BBQ8N257 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST3H2BBQ8N257 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST3H2BBQ8N257 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST3H2BBQ8N257 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HIST3H2BBQ8N257 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HIST3H2BBQ8N257 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms