Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB43Q86YS6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.92■■□□□ 1.1
RAB43Q86YS6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.92■■□□□ 1.1
RAB43Q86YS6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB43Q86YS6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAB43Q86YS6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAB43Q86YS6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAB43Q86YS6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAB43Q86YS6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RAB43Q86YS6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.91■■□□□ 1.1
RAB43Q86YS6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAB43Q86YS6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
RAB43Q86YS6 AC131281.2-201ENST00000520478 145 ntBASIC21.91■■□□□ 1.1
RAB43Q86YS6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.91■■□□□ 1.1
RAB43Q86YS6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.91■■□□□ 1.1
RAB43Q86YS6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.91■■□□□ 1.1
RAB43Q86YS6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.91■■□□□ 1.1
RAB43Q86YS6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAB43Q86YS6 AF131216.4-201ENST00000638924 1588 ntBASIC21.91■■□□□ 1.1
RAB43Q86YS6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB43Q86YS6 AC090877.2-201ENST00000558441 1738 ntBASIC21.9■■□□□ 1.1
RAB43Q86YS6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB43Q86YS6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.9■■□□□ 1.1
RAB43Q86YS6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.9■■□□□ 1.1
RAB43Q86YS6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAB43Q86YS6 MIR3621-201ENST00000580529 85 ntBASIC21.9■■□□□ 1.1
RAB43Q86YS6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.9■■□□□ 1.1
RAB43Q86YS6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB43Q86YS6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAB43Q86YS6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RAB43Q86YS6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAB43Q86YS6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
RAB43Q86YS6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.89■■□□□ 1.09
RAB43Q86YS6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.89■■□□□ 1.09
RAB43Q86YS6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.89■■□□□ 1.09
RAB43Q86YS6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAB43Q86YS6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAB43Q86YS6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
RAB43Q86YS6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAB43Q86YS6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAB43Q86YS6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAB43Q86YS6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.88■■□□□ 1.09
RAB43Q86YS6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB43Q86YS6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB43Q86YS6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.88■■□□□ 1.09
RAB43Q86YS6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB43Q86YS6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.88■■□□□ 1.09
RAB43Q86YS6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAB43Q86YS6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB43Q86YS6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB43Q86YS6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.87■■□□□ 1.09
RAB43Q86YS6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RAB43Q86YS6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.87■■□□□ 1.09
RAB43Q86YS6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAB43Q86YS6 AL136116.3-201ENST00000402907 1138 ntBASIC21.87■■□□□ 1.09
RAB43Q86YS6 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.87■■□□□ 1.09
RAB43Q86YS6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAB43Q86YS6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.87■■□□□ 1.09
RAB43Q86YS6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB43Q86YS6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAB43Q86YS6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAB43Q86YS6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB43Q86YS6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB43Q86YS6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB43Q86YS6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB43Q86YS6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAB43Q86YS6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB43Q86YS6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAB43Q86YS6 AC096887.2-201ENST00000623443 1957 ntBASIC21.86■■□□□ 1.09
RAB43Q86YS6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB43Q86YS6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAB43Q86YS6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAB43Q86YS6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RAB43Q86YS6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RAB43Q86YS6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB43Q86YS6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.84■■□□□ 1.09
RAB43Q86YS6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAB43Q86YS6 ERN1-208ENST00000606895 2068 ntBASIC21.84■■□□□ 1.09
RAB43Q86YS6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB43Q86YS6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.84■■□□□ 1.09
RAB43Q86YS6 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.84■■□□□ 1.09
RAB43Q86YS6 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.84■■□□□ 1.09
RAB43Q86YS6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.84■■□□□ 1.09
RAB43Q86YS6 AC010501.1-201ENST00000606270 1962 ntBASIC21.84■■□□□ 1.09
RAB43Q86YS6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB43Q86YS6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.84■■□□□ 1.09
RAB43Q86YS6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB43Q86YS6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.83■■□□□ 1.09
RAB43Q86YS6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAB43Q86YS6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.83■■□□□ 1.09
RAB43Q86YS6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.83■■□□□ 1.09
RAB43Q86YS6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAB43Q86YS6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAB43Q86YS6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.83■■□□□ 1.09
RAB43Q86YS6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.83■■□□□ 1.09
RAB43Q86YS6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAB43Q86YS6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RAB43Q86YS6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAB43Q86YS6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.83■■□□□ 1.08
RAB43Q86YS6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms