Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXR2Q6PJQ5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.3■■□□□ 1.64
FOXR2Q6PJQ5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
FOXR2Q6PJQ5 AC139795.1-202ENST00000500444 432 ntBASIC25.3■■□□□ 1.64
FOXR2Q6PJQ5 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.3■■□□□ 1.64
FOXR2Q6PJQ5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
FOXR2Q6PJQ5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.3■■□□□ 1.64
FOXR2Q6PJQ5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
FOXR2Q6PJQ5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXR2Q6PJQ5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXR2Q6PJQ5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
FOXR2Q6PJQ5 AC004987.1-201ENST00000428627 508 ntBASIC25.29■■□□□ 1.64
FOXR2Q6PJQ5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
FOXR2Q6PJQ5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
FOXR2Q6PJQ5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
FOXR2Q6PJQ5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
FOXR2Q6PJQ5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.28■■□□□ 1.64
FOXR2Q6PJQ5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
FOXR2Q6PJQ5 AL022069.1-201ENST00000568025 1636 ntBASIC25.28■■□□□ 1.64
FOXR2Q6PJQ5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.28■■□□□ 1.64
FOXR2Q6PJQ5 DUX4L18-201ENST00000553347 1267 ntBASIC25.28■■□□□ 1.64
FOXR2Q6PJQ5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
FOXR2Q6PJQ5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.28■■□□□ 1.64
FOXR2Q6PJQ5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.27■■□□□ 1.64
FOXR2Q6PJQ5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
FOXR2Q6PJQ5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
FOXR2Q6PJQ5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.27■■□□□ 1.64
FOXR2Q6PJQ5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
FOXR2Q6PJQ5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
FOXR2Q6PJQ5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
FOXR2Q6PJQ5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
FOXR2Q6PJQ5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXR2Q6PJQ5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXR2Q6PJQ5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
FOXR2Q6PJQ5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXR2Q6PJQ5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
FOXR2Q6PJQ5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXR2Q6PJQ5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
FOXR2Q6PJQ5 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.26■■□□□ 1.63
FOXR2Q6PJQ5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXR2Q6PJQ5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.26■■□□□ 1.63
FOXR2Q6PJQ5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
FOXR2Q6PJQ5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.26■■□□□ 1.63
FOXR2Q6PJQ5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
FOXR2Q6PJQ5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.25■■□□□ 1.63
FOXR2Q6PJQ5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.25■■□□□ 1.63
FOXR2Q6PJQ5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.25■■□□□ 1.63
FOXR2Q6PJQ5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
FOXR2Q6PJQ5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
FOXR2Q6PJQ5 DUSP8P5-201ENST00000422884 1815 ntBASIC25.25■■□□□ 1.63
FOXR2Q6PJQ5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
FOXR2Q6PJQ5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
FOXR2Q6PJQ5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.25■■□□□ 1.63
FOXR2Q6PJQ5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
FOXR2Q6PJQ5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
FOXR2Q6PJQ5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
FOXR2Q6PJQ5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.24■■□□□ 1.63
FOXR2Q6PJQ5 AC131274.2-201ENST00000580697 1507 ntBASIC25.24■■□□□ 1.63
FOXR2Q6PJQ5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.24■■□□□ 1.63
FOXR2Q6PJQ5 TSPY13P-201ENST00000338964 914 ntBASIC25.24■■□□□ 1.63
FOXR2Q6PJQ5 KRT18P24-201ENST00000344739 1156 ntBASIC25.24■■□□□ 1.63
FOXR2Q6PJQ5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.24■■□□□ 1.63
FOXR2Q6PJQ5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
FOXR2Q6PJQ5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
FOXR2Q6PJQ5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
FOXR2Q6PJQ5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.23■■□□□ 1.63
FOXR2Q6PJQ5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
FOXR2Q6PJQ5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.23■■□□□ 1.63
FOXR2Q6PJQ5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXR2Q6PJQ5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.23■■□□□ 1.63
FOXR2Q6PJQ5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
FOXR2Q6PJQ5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.22■■□□□ 1.63
FOXR2Q6PJQ5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
FOXR2Q6PJQ5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
FOXR2Q6PJQ5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
FOXR2Q6PJQ5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.22■■□□□ 1.63
FOXR2Q6PJQ5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.22■■□□□ 1.63
FOXR2Q6PJQ5 PVT1_1.1-201ENST00000615125 194 ntBASIC25.22■■□□□ 1.63
FOXR2Q6PJQ5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
FOXR2Q6PJQ5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.22■■□□□ 1.63
FOXR2Q6PJQ5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
FOXR2Q6PJQ5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
FOXR2Q6PJQ5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
FOXR2Q6PJQ5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
FOXR2Q6PJQ5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
FOXR2Q6PJQ5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
FOXR2Q6PJQ5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
FOXR2Q6PJQ5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
FOXR2Q6PJQ5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.21■■□□□ 1.63
FOXR2Q6PJQ5 AC120024.1-201ENST00000562672 995 ntBASIC25.21■■□□□ 1.63
FOXR2Q6PJQ5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.21■■□□□ 1.63
FOXR2Q6PJQ5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
FOXR2Q6PJQ5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.21■■□□□ 1.63
FOXR2Q6PJQ5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
FOXR2Q6PJQ5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.21■■□□□ 1.63
FOXR2Q6PJQ5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
FOXR2Q6PJQ5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.2■■□□□ 1.62
FOXR2Q6PJQ5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
FOXR2Q6PJQ5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
FOXR2Q6PJQ5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms