Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 PSMD10-205ENST00000372295 779 ntTSL 5 BASIC6.4□□□□□ -1.389e-7■■■■■ 39
SUB1P53999 PSMD10-203ENST00000340200 713 ntTSL 3 BASIC6.25□□□□□ -1.419e-7■■■■■ 39
SUB1P53999 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.25□□□□□ -1.419e-7■■■■■ 39
SUB1P53999 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.85□□□□□ -1.639e-7■■■■■ 39
SUB1P53999 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.11□□□□□ -0.632e-6■■■■■ 39
SUB1P53999 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC9.91□□□□□ -0.822e-6■■■■■ 39
SUB1P53999 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.832e-6■■■■■ 39
SUB1P53999 RBX1-202ENST00000467617 1871 ntTSL 210.4□□□□□ -0.743e-7■■■■■ 39
SUB1P53999 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.753e-7■■■■■ 39
SUB1P53999 YKT6-204ENST00000447123 1085 ntTSL 512.95□□□□□ -0.342e-9■■■■■ 39
SUB1P53999 YKT6-203ENST00000424864 673 ntTSL 510.15□□□□□ -0.782e-9■■■■■ 39
SUB1P53999 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.164e-12■■■■■ 39
SUB1P53999 EIF4G1-233ENST00000475721 1271 ntTSL 214.87□□□□□ -0.031e-9■■■■■ 39
SUB1P53999 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.51□□□□□ -0.251e-9■■■■■ 39
SUB1P53999 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.341e-9■■■■■ 39
SUB1P53999 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.89□□□□□ -0.351e-9■■■■■ 39
SUB1P53999 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.27□□□□□ -0.451e-9■■■■■ 39
SUB1P53999 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.355e-9■■■■■ 39
SUB1P53999 GLRX3-203ENST00000481034 1921 ntTSL 1 (best)16.92■□□□□ 0.35e-9■■■■■ 39
SUB1P53999 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.585e-9■■■■■ 39
SUB1P53999 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.393e-8■■■■■ 38.9
SUB1P53999 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.383e-8■■■■■ 38.9
SUB1P53999 P4HA2-204ENST00000379100 2563 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.913e-8■■■■■ 38.9
SUB1P53999 P4HA2-205ENST00000379104 2569 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.913e-8■■■■■ 38.9
SUB1P53999 P4HA2-203ENST00000379086 2223 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.053e-8■■■■■ 38.9
SUB1P53999 P4HA2-207ENST00000401867 3349 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.073e-8■■■■■ 38.9
SUB1P53999 P4HA2-218ENST00000474628 743 ntTSL 26.12□□□□□ -1.433e-8■■■■■ 38.9
SUB1P53999 RPS27A-204ENST00000449323 422 ntTSL 32.97□□□□□ -1.932e-17■■■■■ 38.8
SUB1P53999 RPS27A-208ENST00000478196 580 ntTSL 22.97□□□□□ -1.932e-17■■■■■ 38.8
SUB1P53999 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.662e-10■■■■■ 38.7
SUB1P53999 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.286e-8■■■■■ 38.7
SUB1P53999 PDCD2-210ENST00000543284 3255 ntTSL 23.17□□□□□ -1.96e-8■■■■■ 38.7
SUB1P53999 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.615e-10■■■■■ 38.7
SUB1P53999 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.875e-10■■■■■ 38.7
SUB1P53999 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.895e-10■■■■■ 38.7
SUB1P53999 CTNNB1-212ENST00000471014 607 ntTSL 39.33□□□□□ -0.925e-10■■■■■ 38.7
SUB1P53999 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC9.68□□□□□ -0.864e-30■■■■■ 38.7
SUB1P53999 EWSR1-205ENST00000360091 1289 ntTSL 514.69□□□□□ -0.061e-6■■■■■ 38.7
SUB1P53999 EWSR1-218ENST00000483629 1818 ntTSL 514.6□□□□□ -0.071e-6■■■■■ 38.7
SUB1P53999 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.181e-6■■■■■ 38.7
SUB1P53999 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.76□□□□□ -0.211e-6■■■■■ 38.7
SUB1P53999 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.65□□□□□ -0.221e-6■■■■■ 38.7
SUB1P53999 EWSR1-215ENST00000469669 2630 ntTSL 213.31□□□□□ -0.281e-6■■■■■ 38.7
SUB1P53999 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.22□□□□□ -0.291e-6■■■■■ 38.7
SUB1P53999 EWSR1-216ENST00000479135 7285 ntTSL 1 (best)10.16□□□□□ -0.781e-6■■■■■ 38.7
SUB1P53999 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.424e-17■■■■■ 38.7
SUB1P53999 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.67■□□□□ 0.263e-9■■■■■ 38.6
SUB1P53999 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.29□□□□□ -0.123e-9■■■■■ 38.6
SUB1P53999 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.453e-9■■■■■ 38.6
SUB1P53999 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC11.36□□□□□ -0.593e-9■■■■■ 38.6
SUB1P53999 MCM2-209ENST00000491422 2844 ntTSL 511.04□□□□□ -0.643e-12■■■■■ 38.6
SUB1P53999 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.8□□□□□ -0.362e-14■■■■■ 38.6
SUB1P53999 NDUFB8-208ENST00000531189 577 ntTSL 214.36□□□□□ -0.111e-28■■■■■ 38.6
SUB1P53999 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.661e-7■■■■■ 38.6
SUB1P53999 RIDA-206ENST00000522791 884 ntTSL 29.17□□□□□ -0.941e-7■■■■■ 38.6
SUB1P53999 RIDA-205ENST00000521560 761 ntTSL 28.51□□□□□ -1.051e-7■■■■■ 38.6
SUB1P53999 RIDA-204ENST00000520507 848 ntTSL 34.27□□□□□ -1.731e-7■■■■■ 38.6
SUB1P53999 GTSF1-203ENST00000546739 567 ntTSL 42.77□□□□□ -1.971e-7■■■■■ 38.6
SUB1P53999 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.731e-6■■■■■ 38.5
SUB1P53999 GLRX3-205ENST00000496195 317 ntTSL 27.46□□□□□ -1.226e-12■■■■■ 38.4
SUB1P53999 PSMB3-211ENST00000619426 773 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.051e-6■■■■■ 38.4
SUB1P53999 PSMB3-207ENST00000610434 510 ntTSL 37.93□□□□□ -1.141e-6■■■■■ 38.4
SUB1P53999 PSMB3-208ENST00000613870 662 ntTSL 36.67□□□□□ -1.341e-6■■■■■ 38.4
SUB1P53999 PSMB3-212ENST00000620309 552 ntTSL 25.46□□□□□ -1.541e-6■■■■■ 38.4
SUB1P53999 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.555e-9■■■■■ 38.3
SUB1P53999 PSMB5-201ENST00000334454 796 ntTSL 514.78□□□□□ -0.042e-9■■■■■ 38.2
SUB1P53999 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.742e-18■■■■■ 38.2
SUB1P53999 SRSF9-206ENST00000603963 1043 ntTSL 516.19■□□□□ 0.182e-18■■■■■ 38.2
SUB1P53999 SRSF9-203ENST00000548326 1704 nt7.07□□□□□ -1.282e-18■■■■■ 38.2
SUB1P53999 SRSF9-204ENST00000548792 1446 ntTSL 26.94□□□□□ -1.32e-18■■■■■ 38.2
SUB1P53999 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.02■□□□□ -01e-8■■■■■ 38.2
SUB1P53999 ANXA2-203ENST00000421017 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.221e-8■■■■■ 38.2
SUB1P53999 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.341e-8■■■■■ 38.2
SUB1P53999 ANXA2-205ENST00000504475 3528 ntTSL 26.49□□□□□ -1.371e-8■■■■■ 38.2
SUB1P53999 ANXA2-228ENST00000560014 2339 ntTSL 26.43□□□□□ -1.381e-8■■■■■ 38.2
SUB1P53999 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.381e-8■■■■■ 38.2
SUB1P53999 SUPT16H-207ENST00000557394 2324 ntTSL 28.24□□□□□ -1.092e-8■■■■■ 38.2
SUB1P53999 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.272e-8■■■■■ 38.2
SUB1P53999 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.513e-11■■■■■ 38.1
SUB1P53999 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.682e-29■■■■■ 38.1
SUB1P53999 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.71■□□□□ 0.112e-29■■■■■ 38.1
SUB1P53999 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.01□□□□□ -0.492e-29■■■■■ 38.1
SUB1P53999 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.551e-8■■■■■ 38.1
SUB1P53999 DDX18-205ENST00000476149 5674 ntTSL 24.71□□□□□ -1.661e-8■■■■■ 38.1
SUB1P53999 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.29□□□□□ -0.281e-7■■■■■ 38
SUB1P53999 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.31e-7■■■■■ 38
SUB1P53999 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.73□□□□□ -0.371e-7■■■■■ 38
SUB1P53999 CDKN1C-205ENST00000471157 944 ntTSL 218.7■□□□□ 0.584e-8■■■■■ 38
SUB1P53999 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.65■□□□□ 0.14e-8■■■■■ 38
SUB1P53999 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.084e-8■■■■■ 38
SUB1P53999 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.084e-8■■■■■ 38
SUB1P53999 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.044e-8■■■■■ 38
SUB1P53999 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.14e-8■■■■■ 38
SUB1P53999 MFSD1-215ENST00000484166 2121 ntTSL 214.36□□□□□ -0.114e-8■■■■■ 38
SUB1P53999 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.144e-8■■■■■ 38
SUB1P53999 MFSD1-213ENST00000480292 2239 ntTSL 1 (best)13.89□□□□□ -0.194e-8■■■■■ 38
SUB1P53999 PTPRS-206ENST00000588552 5443 ntTSL 1 (best)13.81□□□□□ -0.24e-8■■■■■ 38
SUB1P53999 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.234e-8■■■■■ 38
SUB1P53999 MFSD1-209ENST00000471500 2097 ntTSL 213.58□□□□□ -0.244e-8■■■■■ 38
SUB1P53999 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.41□□□□□ -0.264e-8■■■■■ 38
Retrieved 100 of 11,644 protein–RNA pairs in 224.6 ms