RNA–Protein interactions for RNA: ENST00000491422.1

MCM2-209, Transcript of minichromosome maintenance complex component 2, humanhuman

TSL 5

Gene MCM2, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM2-209ENST00000491422 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.06
MCM2-209ENST00000491422 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
MCM2-209ENST00000491422 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
MCM2-209ENST00000491422 ZCCHC6Q5VYS8 1495 aaKnown RBP23.63■■□□□ 1.37
MCM2-209ENST00000491422 CCDC180Q9P1Z9 1646 aa23.61■■□□□ 1.37
MCM2-209ENST00000491422 DCAF8L2P0C7V8 631 aa23.43■■□□□ 1.34
MCM2-209ENST00000491422 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
MCM2-209ENST00000491422 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
MCM2-209ENST00000491422 DCAF1Q9Y4B6 1507 aa22.83■■□□□ 1.25
MCM2-209ENST00000491422 PCGF6Q9BYE7 350 aa22.5■■□□□ 1.19
MCM2-209ENST00000491422 HRCP23327 699 aa22.49■■□□□ 1.19
MCM2-209ENST00000491422 LOC105371045A0A1W2PR82 267 aa22.43■■□□□ 1.18
MCM2-209ENST00000491422 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
MCM2-209ENST00000491422 ABCC9O60706 1549 aa22.3■■□□□ 1.16
MCM2-209ENST00000491422 RSF1Q96T23 1441 aaPredicted RBP22.19■■□□□ 1.14
MCM2-209ENST00000491422 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
MCM2-209ENST00000491422 TRIM41Q8WV44 630 aa22.04■■□□□ 1.12
MCM2-209ENST00000491422 TRIM26Q12899 539 aaPredicted RBP21.98■■□□□ 1.11
MCM2-209ENST00000491422 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
MCM2-209ENST00000491422 FAM9AQ8IZU1 332 aaPredicted RBP21.95■■□□□ 1.1
MCM2-209ENST00000491422 NACADO15069 1562 aa21.86■■□□□ 1.09
MCM2-209ENST00000491422 CECR2Q9BXF3 1484 aa21.86■■□□□ 1.09
MCM2-209ENST00000491422 EHMT2Q96KQ7 1210 aa21.83■■□□□ 1.08
MCM2-209ENST00000491422 MROH2BQ7Z745 1585 aa21.77■■□□□ 1.08
MCM2-209ENST00000491422 WIZO95785 1651 aa21.66■■□□□ 1.06
MCM2-209ENST00000491422 ZEB1P37275 1124 aaPredicted RBP21.51■■□□□ 1.03
MCM2-209ENST00000491422 BAZ1AQ9NRL2 1556 aaPredicted RBP21.46■■□□□ 1.03
MCM2-209ENST00000491422 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
MCM2-209ENST00000491422 TOP2AP11388 1531 aaKnown RBP21.26■□□□□ 0.99
MCM2-209ENST00000491422 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
MCM2-209ENST00000491422 SMARCA4P51532 1647 aa21.25■□□□□ 0.99
MCM2-209ENST00000491422 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
MCM2-209ENST00000491422 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
MCM2-209ENST00000491422 SMARCA2P51531 1590 aa21.17■□□□□ 0.98
MCM2-209ENST00000491422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.15■□□□□ 0.98
MCM2-209ENST00000491422 PABPN1Q86U42 306 aaKnown RBP eCLIP21.14■□□□□ 0.97
MCM2-209ENST00000491422 TTBK1Q5TCY1 1321 aaPredicted RBP21.13■□□□□ 0.97
MCM2-209ENST00000491422 CCER1Q8TC90 406 aaPredicted RBP21.1■□□□□ 0.97
MCM2-209ENST00000491422 SOGA1O94964 1423 aa21.09■□□□□ 0.97
MCM2-209ENST00000491422 CEP162Q5TB80 1403 aa21.02■□□□□ 0.96
MCM2-209ENST00000491422 UBTFP17480 764 aaKnown RBP21.01■□□□□ 0.95
MCM2-209ENST00000491422 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
MCM2-209ENST00000491422 RUSC2Q8N2Y8 1516 aa20.99■□□□□ 0.95
MCM2-209ENST00000491422 TNIKQ9UKE5 1360 aa20.96■□□□□ 0.95
MCM2-209ENST00000491422 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.94
MCM2-209ENST00000491422 BICRAQ9NZM4 1560 aa20.92■□□□□ 0.94
MCM2-209ENST00000491422 EEA1Q15075 1411 aa20.91■□□□□ 0.94
MCM2-209ENST00000491422 GOLGA3Q08378 1498 aa20.81■□□□□ 0.92
MCM2-209ENST00000491422 SCAF1Q9H7N4 1312 aaKnown RBP20.81■□□□□ 0.92
MCM2-209ENST00000491422 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
MCM2-209ENST00000491422 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
MCM2-209ENST00000491422 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
MCM2-209ENST00000491422 DIEXFQ68CQ4 756 aaKnown RBP20.71■□□□□ 0.91
MCM2-209ENST00000491422 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
MCM2-209ENST00000491422 CEP164Q9UPV0 1460 aa20.68■□□□□ 0.9
MCM2-209ENST00000491422 RANGAP1P46060 587 aaPredicted RBP20.66■□□□□ 0.9
MCM2-209ENST00000491422 HNRNPUL2Q1KMD3 747 aaKnown RBP20.63■□□□□ 0.89
MCM2-209ENST00000491422 CLIP1P30622 1438 aa20.62■□□□□ 0.89
MCM2-209ENST00000491422 KIF21BO75037 1637 aa20.6■□□□□ 0.89
MCM2-209ENST00000491422 ACIN1Q9UKV3 1341 aaKnown RBP20.58■□□□□ 0.88
MCM2-209ENST00000491422 APLP2Q06481 763 aa20.56■□□□□ 0.88
MCM2-209ENST00000491422 NEUROD1Q13562 356 aa20.56■□□□□ 0.88
MCM2-209ENST00000491422 RAPGEF2Q9Y4G8 1499 aa20.55■□□□□ 0.88
MCM2-209ENST00000491422 ZNF316A6NFI3 1004 aaPredicted RBP20.51■□□□□ 0.87
MCM2-209ENST00000491422 VPS8Q8N3P4 1428 aa20.51■□□□□ 0.87
MCM2-209ENST00000491422 CENPBP07199 599 aaPredicted RBP20.46■□□□□ 0.87
MCM2-209ENST00000491422 TOP2BQ02880 1626 aa20.43■□□□□ 0.86
MCM2-209ENST00000491422 PELP1Q8IZL8 1130 aaKnown RBP20.41■□□□□ 0.86
MCM2-209ENST00000491422 GTF3C3Q9Y5Q9 886 aa20.38■□□□□ 0.85
MCM2-209ENST00000491422 BIVM-ERCC5R4GMW8 1640 aa20.32■□□□□ 0.84
MCM2-209ENST00000491422 YTHDC1Q96MU7 727 aaKnown RBP20.31■□□□□ 0.84
MCM2-209ENST00000491422 PRXQ9BXM0 1461 aa20.28■□□□□ 0.84
MCM2-209ENST00000491422 NCAPD3P42695 1498 aa20.26■□□□□ 0.83
MCM2-209ENST00000491422 MIER1Q8N108 512 aa20.26■□□□□ 0.83
MCM2-209ENST00000491422 KANK4Q5T7N3 995 aaPredicted RBP20.25■□□□□ 0.83
MCM2-209ENST00000491422 CUX1P39880 1505 aa20.24■□□□□ 0.83
MCM2-209ENST00000491422 ERICH3Q5RHP9 1530 aa20.24■□□□□ 0.83
MCM2-209ENST00000491422 ARAP1Q96P48 1450 aa20.23■□□□□ 0.83
MCM2-209ENST00000491422 HMGXB3Q12766 1538 aa20.21■□□□□ 0.83
MCM2-209ENST00000491422 KIF27Q86VH2 1401 aa20.21■□□□□ 0.83
MCM2-209ENST00000491422 CFTRP13569 1480 aa20.14■□□□□ 0.81
MCM2-209ENST00000491422 DHX57Q6P158 1386 aaKnown RBP20.11■□□□□ 0.81
MCM2-209ENST00000491422 ITGAEP38570 1179 aa20.08■□□□□ 0.8
MCM2-209ENST00000491422 CLSPNQ9HAW4 1339 aa20.06■□□□□ 0.8
MCM2-209ENST00000491422 ARHGAP35Q9NRY4 1499 aa20.05■□□□□ 0.8
MCM2-209ENST00000491422 RRBP1Q9P2E9 1410 aaKnown RBP20.02■□□□□ 0.8
MCM2-209ENST00000491422 CUX2O14529 1486 aa20.02■□□□□ 0.8
MCM2-209ENST00000491422 CCNB3Q8WWL7 1395 aa20■□□□□ 0.79
MCM2-209ENST00000491422 IGF1RP08069 1367 aa19.99■□□□□ 0.79
MCM2-209ENST00000491422 CADPSQ9ULU8 1353 aa19.94■□□□□ 0.78
MCM2-209ENST00000491422 CARMIL1Q5VZK9 1371 aa19.93■□□□□ 0.78
MCM2-209ENST00000491422 FGD5Q6ZNL6 1462 aa19.89■□□□□ 0.77
MCM2-209ENST00000491422 PRDM2Q13029 1718 aa19.89■□□□□ 0.77
MCM2-209ENST00000491422 P3H3Q8IVL6 736 aa19.89■□□□□ 0.77
MCM2-209ENST00000491422 ATP1B4Q9UN42 357 aaPredicted RBP19.88■□□□□ 0.77
MCM2-209ENST00000491422 RAB3GAP2Q9H2M9 1393 aa19.84■□□□□ 0.77
MCM2-209ENST00000491422 TIAM1Q13009 1591 aa19.83■□□□□ 0.76
MCM2-209ENST00000491422 FAM50AQ14320 339 aaKnown RBP19.82■□□□□ 0.76
MCM2-209ENST00000491422 LRRC9Q6ZRR7 1453 aa19.78■□□□□ 0.76
MCM2-209ENST00000491422 PHLDB1Q86UU1 1377 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms