Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRP9P49458 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRP9P49458 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SRP9P49458 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SRP9P49458 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SRP9P49458 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRP9P49458 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRP9P49458 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.35■□□□□ 0.85
SRP9P49458 SLC6A10P-202ENST00000431994 2058 ntBASIC20.34■□□□□ 0.85
SRP9P49458 AC004812.2-201ENST00000611079 2094 ntBASIC20.34■□□□□ 0.85
SRP9P49458 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRP9P49458 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRP9P49458 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SRP9P49458 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.34■□□□□ 0.85
SRP9P49458 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SRP9P49458 ATP5G2P3-201ENST00000429083 425 ntBASIC20.34■□□□□ 0.85
SRP9P49458 SPCS2P3-201ENST00000500401 656 ntBASIC20.34■□□□□ 0.85
SRP9P49458 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.34■□□□□ 0.85
SRP9P49458 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.34■□□□□ 0.85
SRP9P49458 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRP9P49458 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRP9P49458 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.34■□□□□ 0.85
SRP9P49458 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRP9P49458 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SRP9P49458 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SRP9P49458 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SRP9P49458 TSPY13P-201ENST00000338964 914 ntBASIC20.33■□□□□ 0.85
SRP9P49458 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.33■□□□□ 0.85
SRP9P49458 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.33■□□□□ 0.85
SRP9P49458 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.33■□□□□ 0.85
SRP9P49458 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRP9P49458 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.33■□□□□ 0.84
SRP9P49458 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRP9P49458 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRP9P49458 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRP9P49458 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.33■□□□□ 0.84
SRP9P49458 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRP9P49458 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRP9P49458 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRP9P49458 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRP9P49458 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRP9P49458 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRP9P49458 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SRP9P49458 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.32■□□□□ 0.84
SRP9P49458 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.32■□□□□ 0.84
SRP9P49458 AC004987.1-201ENST00000428627 508 ntBASIC20.32■□□□□ 0.84
SRP9P49458 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRP9P49458 AC141586.4-201ENST00000624558 1573 ntBASIC20.32■□□□□ 0.84
SRP9P49458 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.32■□□□□ 0.84
SRP9P49458 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRP9P49458 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRP9P49458 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRP9P49458 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SRP9P49458 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SRP9P49458 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.31■□□□□ 0.84
SRP9P49458 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRP9P49458 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.31■□□□□ 0.84
SRP9P49458 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.31■□□□□ 0.84
SRP9P49458 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.31■□□□□ 0.84
SRP9P49458 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRP9P49458 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRP9P49458 ABCB10P4-201ENST00000566803 2184 ntBASIC20.31■□□□□ 0.84
SRP9P49458 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRP9P49458 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRP9P49458 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.3■□□□□ 0.84
SRP9P49458 DUX4L18-201ENST00000553347 1267 ntBASIC20.3■□□□□ 0.84
SRP9P49458 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SRP9P49458 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRP9P49458 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRP9P49458 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRP9P49458 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRP9P49458 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
SRP9P49458 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRP9P49458 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRP9P49458 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRP9P49458 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRP9P49458 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRP9P49458 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SRP9P49458 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRP9P49458 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SRP9P49458 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.28■□□□□ 0.84
SRP9P49458 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRP9P49458 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SRP9P49458 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRP9P49458 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRP9P49458 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SRP9P49458 AC139795.1-202ENST00000500444 432 ntBASIC20.28■□□□□ 0.84
SRP9P49458 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRP9P49458 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRP9P49458 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SRP9P49458 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRP9P49458 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRP9P49458 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRP9P49458 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
SRP9P49458 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRP9P49458 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.27■□□□□ 0.84
SRP9P49458 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.27■□□□□ 0.84
SRP9P49458 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRP9P49458 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SRP9P49458 RPS2P7-201ENST00000447334 885 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms