Protein–RNA interactions for Protein: P40438

VTH1, VPS10 homolog 1, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH1P40438 SUP53tL(CAA)C 82 nt7.1□□□□□ -1.27
VTH1P40438 tL(CAA)DtL(CAA)D 82 nt7.1□□□□□ -1.27
VTH1P40438 tL(CAA)G1tL(CAA)G1 82 nt7.1□□□□□ -1.27
VTH1P40438 SUP54tL(CAA)G2 82 nt7.1□□□□□ -1.27
VTH1P40438 tL(CAA)G3tL(CAA)G3 82 nt7.1□□□□□ -1.27
VTH1P40438 tL(CAA)KtL(CAA)K 82 nt7.1□□□□□ -1.27
VTH1P40438 tL(CAA)LtL(CAA)L 82 nt7.1□□□□□ -1.27
VTH1P40438 tL(CAA)MtL(CAA)M 82 nt7.1□□□□□ -1.27
VTH1P40438 tL(CAA)NtL(CAA)N 82 nt7.1□□□□□ -1.27
VTH1P40438 YMR245WYMR245W 621 nt7.1□□□□□ -1.27
VTH1P40438 ICY2YPL250C 411 nt7.1□□□□□ -1.27
VTH1P40438 APC4YDR118W 1959 nt7.1□□□□□ -1.27
VTH1P40438 PIC2YER053C 903 nt7.09□□□□□ -1.27
VTH1P40438 VHS1YDR247W 1386 nt7.09□□□□□ -1.28
VTH1P40438 SKI2YLR398C 3864 nt7.08□□□□□ -1.28
VTH1P40438 PUT1YLR142W 1431 nt7.08□□□□□ -1.28
VTH1P40438 YDR417CYDR417C 372 nt7.07□□□□□ -1.28
VTH1P40438 TYW3YGL050W 822 nt7.07□□□□□ -1.28
VTH1P40438 UBI4YLL039C 1146 nt7.07□□□□□ -1.28
VTH1P40438 TLG2YOL018C 1194 nt7.07□□□□□ -1.28
VTH1P40438 RAD30YDR419W 1899 nt7.07□□□□□ -1.28
VTH1P40438 GPA1YHR005C 1419 nt7.07□□□□□ -1.28
VTH1P40438 RET1YOR207C 3450 nt7.07□□□□□ -1.28
VTH1P40438 YMR102CYMR102C 2505 nt7.07□□□□□ -1.28
VTH1P40438 BUD16YEL029C 939 nt7.06□□□□□ -1.28
VTH1P40438 ASK10YGR097W 3441 nt7.06□□□□□ -1.28
VTH1P40438 SAP4YGL229C 2457 nt7.06□□□□□ -1.28
VTH1P40438 CCR4YAL021C 2514 nt7.06□□□□□ -1.28
VTH1P40438 TMA17YDL110C 453 nt7.06□□□□□ -1.28
VTH1P40438 YPR071WYPR071W 636 nt7.06□□□□□ -1.28
VTH1P40438 BUD22YMR014W 1560 nt7.05□□□□□ -1.28
VTH1P40438 VTS1YOR359W 1572 nt7.05□□□□□ -1.28
VTH1P40438 YNG1YOR064C 660 nt7.05□□□□□ -1.28
VTH1P40438 YMR196WYMR196W 3267 nt7.05□□□□□ -1.28
VTH1P40438 CBF5YLR175W 1452 nt7.05□□□□□ -1.28
VTH1P40438 ATG26YLR189C 3597 nt7.04□□□□□ -1.28
VTH1P40438 RRN9YMR270C 1098 nt7.04□□□□□ -1.28
VTH1P40438 ZPS1YOL154W 750 nt7.04□□□□□ -1.28
VTH1P40438 GSP2YOR185C 663 nt7.04□□□□□ -1.28
VTH1P40438 MET31YPL038W 534 nt7.04□□□□□ -1.28
VTH1P40438 RFA1YAR007C 1866 nt7.04□□□□□ -1.28
VTH1P40438 YOL075CYOL075C 3885 nt7.03□□□□□ -1.28
VTH1P40438 HXT14YNL318C 1623 nt7.03□□□□□ -1.28
VTH1P40438 ALG6YOR002W 1635 nt7.03□□□□□ -1.28
VTH1P40438 ASA1YPR085C 1332 nt7.03□□□□□ -1.28
VTH1P40438 VCX1YDL128W 1236 nt7.03□□□□□ -1.28
VTH1P40438 YBL006W-AYBL006W-A 150 nt7.03□□□□□ -1.28
VTH1P40438 TUB3YML124C 1338 nt7.02□□□□□ -1.29
VTH1P40438 TRP3YKL211C 1455 nt7.02□□□□□ -1.29
VTH1P40438 KRE28YDR532C 1158 nt7.01□□□□□ -1.29
VTH1P40438 SLT2YHR030C 1455 nt7.01□□□□□ -1.29
VTH1P40438 ARB1YER036C 1833 nt7.01□□□□□ -1.29
VTH1P40438 YGR153WYGR153W 654 nt7.01□□□□□ -1.29
VTH1P40438 MRPL20YKR085C 588 nt7.01□□□□□ -1.29
VTH1P40438 CSC1YLR241W 2349 nt7.01□□□□□ -1.29
VTH1P40438 BRE2YLR015W 1518 nt7□□□□□ -1.29
VTH1P40438 ABF1YKL112W 2196 nt7□□□□□ -1.29
VTH1P40438 NSG2YNL156C 900 nt7□□□□□ -1.29
VTH1P40438 RER1YCL001W 567 nt7□□□□□ -1.29
VTH1P40438 CAF4YKR036C 1932 nt6.99□□□□□ -1.29
VTH1P40438 GAD1YMR250W 1758 nt6.99□□□□□ -1.29
VTH1P40438 SFT2YBL102W 648 nt6.99□□□□□ -1.29
VTH1P40438 RRP40YOL142W 723 nt6.99□□□□□ -1.29
VTH1P40438 ROT2YBR229C 2865 nt6.99□□□□□ -1.29
VTH1P40438 PUS1YPL212C 1635 nt6.99□□□□□ -1.29
VTH1P40438 SYG1YIL047C 2709 nt6.98□□□□□ -1.29
VTH1P40438 CBK1YNL161W 2271 nt6.98□□□□□ -1.29
VTH1P40438 SUP35YDR172W 2058 nt6.98□□□□□ -1.29
VTH1P40438 YGL152CYGL152C 678 nt6.98□□□□□ -1.29
VTH1P40438 TRX2YGR209C 315 nt6.98□□□□□ -1.29
VTH1P40438 RPL19AYBR084C-A 570 nt6.98□□□□□ -1.29
VTH1P40438 ISY1YJR050W 708 nt6.97□□□□□ -1.29
VTH1P40438 LYP1YNL268W 1836 nt6.97□□□□□ -1.29
VTH1P40438 YER145C-AYER145C-A 438 nt6.96□□□□□ -1.29
VTH1P40438 GTO1YGR154C 1071 nt6.96□□□□□ -1.29
VTH1P40438 RTC5YOR118W 1704 nt6.96□□□□□ -1.29
VTH1P40438 SED4YCR067C 3198 nt6.96□□□□□ -1.29
VTH1P40438 GSY1YFR015C 2127 nt6.96□□□□□ -1.29
VTH1P40438 GDH2YDL215C 3279 nt6.96□□□□□ -1.3
VTH1P40438 DSC2YOL073C 969 nt6.96□□□□□ -1.3
VTH1P40438 MAS1YLR163C 1389 nt6.95□□□□□ -1.3
VTH1P40438 SKG3YLR187W 3081 nt6.95□□□□□ -1.3
VTH1P40438 BSP1YPR171W 1731 nt6.95□□□□□ -1.3
VTH1P40438 ALD6YPL061W 1503 nt6.94□□□□□ -1.3
VTH1P40438 FRA2YGL220W 363 nt6.94□□□□□ -1.3
VTH1P40438 RIM101YHL027W 1878 nt6.94□□□□□ -1.3
VTH1P40438 YOR379CYOR379C 339 nt6.93□□□□□ -1.3
VTH1P40438 VMA2YBR127C 1554 nt6.93□□□□□ -1.3
VTH1P40438 RIA1YNL163C 3333 nt6.92□□□□□ -1.3
VTH1P40438 RXT3YDL076C 885 nt6.92□□□□□ -1.3
VTH1P40438 tS(AGA)D3tS(AGA)D3 83 nt6.92□□□□□ -1.3
VTH1P40438 NKP2YLR315W 462 nt6.92□□□□□ -1.3
VTH1P40438 CTR3YLR411W 726 nt6.92□□□□□ -1.3
VTH1P40438 SOL1YNR034W 966 nt6.92□□□□□ -1.3
VTH1P40438 TRS33YOR115C 807 nt6.92□□□□□ -1.3
VTH1P40438 FRE6YLL051C 2139 nt6.92□□□□□ -1.3
VTH1P40438 MTF1YMR228W 1026 nt6.91□□□□□ -1.3
VTH1P40438 COP1YDL145C 3606 nt6.91□□□□□ -1.3
VTH1P40438 KEX1YGL203C 2190 nt6.91□□□□□ -1.3
VTH1P40438 KAR2YJL034W 2049 nt6.9□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms