RNA–Protein interactions for RNA: YLR241W

CSC1, Transcript of Calcium permeable gated cation channel, yeastyeast

Gene CSC1, Length 2,349 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSC1YLR241W BFR2Q06631 534 aaKnown RBP9.37□□□□□ -0.91
CSC1YLR241W NOP2P40991 618 aaKnown RBP9.08□□□□□ -0.96
CSC1YLR241W RQC2Q12532 1038 aaKnown RBP9.05□□□□□ -0.96
CSC1YLR241W NSR1P27476 414 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
CSC1YLR241W SPA2P23201 1466 aaKnown RBP8.81□□□□□ -1
CSC1YLR241W SSN2P38931 1420 aa8.73□□□□□ -1.01
CSC1YLR241W SGS1P35187 1447 aa8.7□□□□□ -1.02
CSC1YLR241W EBP2P36049 427 aaKnown RBP8.64□□□□□ -1.03
CSC1YLR241W SKI3P17883 1432 aaKnown RBP8.61□□□□□ -1.03
CSC1YLR241W CAB3P36076 571 aa8.6□□□□□ -1.03
CSC1YLR241W YPR148CQ06523 435 aa8.53□□□□□ -1.04
CSC1YLR241W DRS1P32892 752 aaKnown RBP8.47□□□□□ -1.05
CSC1YLR241W RSE1Q04693 1361 aaKnown RBP8.43□□□□□ -1.06
CSC1YLR241W SIS2P36024 562 aa8.34□□□□□ -1.07
CSC1YLR241W URN1Q06525 465 aaKnown RBP8.3□□□□□ -1.08
CSC1YLR241W AVT3P36062 692 aa8.28□□□□□ -1.08
CSC1YLR241W MMS22Q06164 1454 aa8.23□□□□□ -1.09
CSC1YLR241W ENP1P38333 483 aaKnown RBP8.21□□□□□ -1.1
CSC1YLR241W TCB3Q03640 1545 aaKnown RBP8.18□□□□□ -1.1
CSC1YLR241W TAF7Q05021 590 aa8.15□□□□□ -1.1
CSC1YLR241W UFD4P33202 1483 aa8.13□□□□□ -1.11
CSC1YLR241W SPT7P35177 1332 aa8.13□□□□□ -1.11
CSC1YLR241W XRN1P22147 1528 aaKnown RBP8.09□□□□□ -1.11
CSC1YLR241W INO80P53115 1489 aa8.08□□□□□ -1.12
CSC1YLR241W CHD1P32657 1468 aa8.05□□□□□ -1.12
CSC1YLR241W MON2P48563 1636 aaPredicted RBP8.05□□□□□ -1.12
CSC1YLR241W STH1P32597 1359 aa8.05□□□□□ -1.12
CSC1YLR241W LEO1P38439 464 aa8.04□□□□□ -1.12
CSC1YLR241W TRM732Q03496 1420 aa8.03□□□□□ -1.12
CSC1YLR241W PRS1P32895 427 aaKnown RBP8.02□□□□□ -1.13
CSC1YLR241W YFR016CP43597 1233 aaKnown RBP8.01□□□□□ -1.13
CSC1YLR241W POL5P39985 1022 aaKnown RBP8.01□□□□□ -1.13
CSC1YLR241W LEU3P08638 886 aa8□□□□□ -1.13
CSC1YLR241W SAS10Q12136 610 aaPredicted RBP7.99□□□□□ -1.13
CSC1YLR241W CFT1Q06632 1357 aaKnown RBP7.98□□□□□ -1.13
CSC1YLR241W SEC3P33332 1336 aaKnown RBP7.97□□□□□ -1.13
CSC1YLR241W CLC1P17891 233 aa7.97□□□□□ -1.13
CSC1YLR241W TCB2P48231 1178 aa7.97□□□□□ -1.13
CSC1YLR241W IME2P32581 645 aa7.96□□□□□ -1.13
CSC1YLR241W SPP41P38904 1435 aa7.95□□□□□ -1.14
CSC1YLR241W CWC22P53333 577 aaKnown RBP7.95□□□□□ -1.14
CSC1YLR241W AIM44Q99299 758 aa7.94□□□□□ -1.14
CSC1YLR241W SSM4P40318 1319 aa7.92□□□□□ -1.14
CSC1YLR241W FUN12P39730 1002 aaKnown RBP7.9□□□□□ -1.14
CSC1YLR241W IKI3Q06706 1349 aaKnown RBP7.9□□□□□ -1.14
CSC1YLR241W MNN4P36044 1178 aa7.89□□□□□ -1.15
CSC1YLR241W ECM5Q03214 1411 aa7.89□□□□□ -1.15
CSC1YLR241W RTT106P40161 455 aa7.89□□□□□ -1.15
CSC1YLR241W MYO2P19524 1574 aaKnown RBP7.88□□□□□ -1.15
CSC1YLR241W PDR10P51533 1564 aa7.88□□□□□ -1.15
CSC1YLR241W OPY1P38271 328 aa7.86□□□□□ -1.15
CSC1YLR241W SPT21P35209 758 aa7.83□□□□□ -1.16
CSC1YLR241W RPC31P17890 251 aa7.81□□□□□ -1.16
CSC1YLR241W TFA1P36100 482 aa7.79□□□□□ -1.16
CSC1YLR241W EAF7P53911 425 aaKnown RBP7.79□□□□□ -1.16
CSC1YLR241W BUD4P47136 1447 aa7.79□□□□□ -1.16
CSC1YLR241W RPS0BP46654 252 aaKnown RBP7.79□□□□□ -1.16
CSC1YLR241W BPT1P14772 1559 aa7.79□□□□□ -1.16
CSC1YLR241W SPT6P23615 1451 aaKnown RBP7.78□□□□□ -1.16
CSC1YLR241W PSD2P53037 1138 aaKnown RBP7.78□□□□□ -1.16
CSC1YLR241W FPR3P38911 411 aaKnown RBP7.76□□□□□ -1.17
CSC1YLR241W TAF2P23255 1407 aa7.76□□□□□ -1.17
CSC1YLR241W SCC2Q04002 1493 aa7.75□□□□□ -1.17
CSC1YLR241W STU1P38198 1513 aa7.74□□□□□ -1.17
CSC1YLR241W SRB8P25648 1427 aa7.74□□□□□ -1.17
CSC1YLR241W HSL1P34244 1518 aa7.74□□□□□ -1.17
CSC1YLR241W YGR130CP53278 816 aa7.74□□□□□ -1.17
CSC1YLR241W PEP1P32319 1579 aa7.73□□□□□ -1.17
CSC1YLR241W ENV11P53246 860 aa7.72□□□□□ -1.17
CSC1YLR241W SNF7P39929 240 aaKnown RBP7.7□□□□□ -1.18
CSC1YLR241W NUP170P38181 1502 aa7.7□□□□□ -1.18
CSC1YLR241W DJP1P40564 432 aa7.69□□□□□ -1.18
CSC1YLR241W TOP2P06786 1428 aaKnown RBP7.68□□□□□ -1.18
CSC1YLR241W REV3P14284 1504 aa7.68□□□□□ -1.18
CSC1YLR241W YLR419WQ06698 1435 aaKnown RBP7.66□□□□□ -1.18
CSC1YLR241W MLP2P40457 1679 aa7.66□□□□□ -1.18
CSC1YLR241W HIR3P47171 1648 aa7.65□□□□□ -1.19
CSC1YLR241W KRI1P42846 591 aaKnown RBP7.64□□□□□ -1.19
CSC1YLR241W TY1B-DR4Q07793 1604 aa7.64□□□□□ -1.19
CSC1YLR241W THO2P53552 1597 aaKnown RBP7.64□□□□□ -1.19
CSC1YLR241W NAP1P25293 417 aaKnown RBP7.64□□□□□ -1.19
CSC1YLR241W ORC1P54784 914 aaPredicted RBP7.64□□□□□ -1.19
CSC1YLR241W DIP2Q12220 943 aaPredicted RBP7.64□□□□□ -1.19
CSC1YLR241W QCR6P00127 147 aa7.63□□□□□ -1.19
CSC1YLR241W ROX1P25042 368 aa7.63□□□□□ -1.19
CSC1YLR241W SLN1P39928 1220 aaPredicted RBP7.63□□□□□ -1.19
CSC1YLR241W PAN1P32521 1480 aa7.63□□□□□ -1.19
CSC1YLR241W CTR9P89105 1077 aa7.62□□□□□ -1.19
CSC1YLR241W SSK2P53599 1579 aa7.62□□□□□ -1.19
CSC1YLR241W PAF1P38351 445 aa7.62□□□□□ -1.19
CSC1YLR241W NUG1P40010 520 aaKnown RBP7.62□□□□□ -1.19
CSC1YLR241W YTA7P40340 1379 aa7.61□□□□□ -1.19
CSC1YLR241W MMS1Q06211 1407 aa7.61□□□□□ -1.19
CSC1YLR241W IFH1P39520 1085 aa7.61□□□□□ -1.19
CSC1YLR241W MTC1P47018 478 aaKnown RBP7.61□□□□□ -1.19
CSC1YLR241W FPR4Q06205 392 aaPredicted RBP7.6□□□□□ -1.19
CSC1YLR241W RNA1P11745 407 aaKnown RBP7.6□□□□□ -1.19
CSC1YLR241W SWE1P32944 819 aa7.6□□□□□ -1.19
CSC1YLR241W YCF1P39109 1515 aaKnown RBP7.59□□□□□ -1.19
CSC1YLR241W RAD26P40352 1085 aa7.59□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms