RNA–Protein interactions for RNA: YHL027W

RIM101, Transcript of Cys2His2 zinc-finger transcriptional repressor, yeastyeast

Gene RIM101, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM101YHL027W DRS1P32892 752 aaKnown RBP9.15□□□□□ -0.95
RIM101YHL027W TFA1P36100 482 aa8.79□□□□□ -1
RIM101YHL027W RQC2Q12532 1038 aaKnown RBP8.76□□□□□ -1.01
RIM101YHL027W SPA2P23201 1466 aaKnown RBP8.66□□□□□ -1.02
RIM101YHL027W TAF7Q05021 590 aa8.62□□□□□ -1.03
RIM101YHL027W MTC1P47018 478 aaKnown RBP8.49□□□□□ -1.05
RIM101YHL027W SGS1P35187 1447 aa8.47□□□□□ -1.05
RIM101YHL027W BFR2Q06631 534 aaKnown RBP8.46□□□□□ -1.06
RIM101YHL027W SSN2P38931 1420 aa8.43□□□□□ -1.06
RIM101YHL027W SKI3P17883 1432 aaKnown RBP8.31□□□□□ -1.08
RIM101YHL027W INO80P53115 1489 aa8.21□□□□□ -1.1
RIM101YHL027W NOP2P40991 618 aaKnown RBP8.11□□□□□ -1.11
RIM101YHL027W CHD1P32657 1468 aa7.94□□□□□ -1.14
RIM101YHL027W NSR1P27476 414 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
RIM101YHL027W MMS22Q06164 1454 aa7.89□□□□□ -1.15
RIM101YHL027W TCB3Q03640 1545 aaKnown RBP7.83□□□□□ -1.16
RIM101YHL027W XRN1P22147 1528 aaKnown RBP7.79□□□□□ -1.16
RIM101YHL027W UFD4P33202 1483 aa7.78□□□□□ -1.16
RIM101YHL027W TY1B-DR4Q07793 1604 aa7.74□□□□□ -1.17
RIM101YHL027W DMA1P38823 416 aa7.72□□□□□ -1.17
RIM101YHL027W LEO1P38439 464 aa7.71□□□□□ -1.18
RIM101YHL027W HSL1P34244 1518 aa7.69□□□□□ -1.18
RIM101YHL027W THO2P53552 1597 aaKnown RBP7.65□□□□□ -1.18
RIM101YHL027W SPP41P38904 1435 aa7.64□□□□□ -1.19
RIM101YHL027W MON2P48563 1636 aaPredicted RBP7.62□□□□□ -1.19
RIM101YHL027W SPT6P23615 1451 aaKnown RBP7.62□□□□□ -1.19
RIM101YHL027W TRM732Q03496 1420 aa7.62□□□□□ -1.19
RIM101YHL027W ENP1P38333 483 aaKnown RBP7.61□□□□□ -1.19
RIM101YHL027W AVT3P36062 692 aa7.6□□□□□ -1.19
RIM101YHL027W SIN3P22579 1536 aa7.6□□□□□ -1.19
RIM101YHL027W CAB3P36076 571 aa7.59□□□□□ -1.19
RIM101YHL027W HIR3P47171 1648 aa7.58□□□□□ -1.2
RIM101YHL027W EBP2P36049 427 aaKnown RBP7.58□□□□□ -1.2
RIM101YHL027W SSK2P53599 1579 aa7.57□□□□□ -1.2
RIM101YHL027W REV3P14284 1504 aa7.57□□□□□ -1.2
RIM101YHL027W STU1P38198 1513 aa7.57□□□□□ -1.2
RIM101YHL027W MYO2P19524 1574 aaKnown RBP7.56□□□□□ -1.2
RIM101YHL027W IKI3Q06706 1349 aaKnown RBP7.56□□□□□ -1.2
RIM101YHL027W RSE1Q04693 1361 aaKnown RBP7.55□□□□□ -1.2
RIM101YHL027W NUP170P38181 1502 aa7.53□□□□□ -1.2
RIM101YHL027W STH1P32597 1359 aa7.52□□□□□ -1.21
RIM101YHL027W DIP2Q12220 943 aaPredicted RBP7.49□□□□□ -1.21
RIM101YHL027W ESP1Q03018 1630 aa7.49□□□□□ -1.21
RIM101YHL027W YTA7P40340 1379 aa7.48□□□□□ -1.21
RIM101YHL027W POL1P13382 1468 aa7.48□□□□□ -1.21
RIM101YHL027W TAF2P23255 1407 aa7.46□□□□□ -1.22
RIM101YHL027W ECM5Q03214 1411 aa7.46□□□□□ -1.22
RIM101YHL027W POL5P39985 1022 aaKnown RBP7.45□□□□□ -1.22
RIM101YHL027W MLP2P40457 1679 aa7.44□□□□□ -1.22
RIM101YHL027W SEC3P33332 1336 aaKnown RBP7.44□□□□□ -1.22
RIM101YHL027W BPT1P14772 1559 aa7.44□□□□□ -1.22
RIM101YHL027W YPR148CQ06523 435 aa7.43□□□□□ -1.22
RIM101YHL027W SCC2Q04002 1493 aa7.42□□□□□ -1.22
RIM101YHL027W SSM4P40318 1319 aa7.4□□□□□ -1.22
RIM101YHL027W SAS10Q12136 610 aaPredicted RBP7.4□□□□□ -1.23
RIM101YHL027W SPT7P35177 1332 aa7.39□□□□□ -1.23
RIM101YHL027W MYO4P32492 1471 aa7.38□□□□□ -1.23
RIM101YHL027W PDR10P51533 1564 aa7.38□□□□□ -1.23
RIM101YHL027W PEP1P32319 1579 aa7.37□□□□□ -1.23
RIM101YHL027W URN1Q06525 465 aaKnown RBP7.36□□□□□ -1.23
RIM101YHL027W PRS1P32895 427 aaKnown RBP7.34□□□□□ -1.23
RIM101YHL027W SMC4Q12267 1418 aa7.33□□□□□ -1.24
RIM101YHL027W DNA2P38859 1522 aa7.32□□□□□ -1.24
RIM101YHL027W YOR1P53049 1477 aa7.31□□□□□ -1.24
RIM101YHL027W PAN1P32521 1480 aa7.31□□□□□ -1.24
RIM101YHL027W RKR1Q04781 1562 aa7.3□□□□□ -1.24
RIM101YHL027W YPK9Q12697 1472 aa7.3□□□□□ -1.24
RIM101YHL027W BUD4P47136 1447 aa7.29□□□□□ -1.24
RIM101YHL027W SNQ2P32568 1501 aaKnown RBP7.29□□□□□ -1.24
RIM101YHL027W SWR1Q05471 1514 aa7.28□□□□□ -1.24
RIM101YHL027W NAP1P25293 417 aaKnown RBP7.28□□□□□ -1.24
RIM101YHL027W AIM44Q99299 758 aa7.27□□□□□ -1.25
RIM101YHL027W YCF1P39109 1515 aaKnown RBP7.26□□□□□ -1.25
RIM101YHL027W SRB8P25648 1427 aa7.26□□□□□ -1.25
RIM101YHL027W YLR419WQ06698 1435 aaKnown RBP7.24□□□□□ -1.25
RIM101YHL027W RTT106P40161 455 aa7.24□□□□□ -1.25
RIM101YHL027W KOG1P38873 1557 aa7.23□□□□□ -1.25
RIM101YHL027W PDR15Q04182 1529 aaKnown RBP7.23□□□□□ -1.25
RIM101YHL027W TSC11P40061 1430 aa7.21□□□□□ -1.26
RIM101YHL027W GEA1P47102 1408 aaPredicted RBP7.21□□□□□ -1.26
RIM101YHL027W IME2P32581 645 aa7.2□□□□□ -1.26
RIM101YHL027W SIS2P36024 562 aa7.2□□□□□ -1.26
RIM101YHL027W ATG2P53855 1592 aa7.2□□□□□ -1.26
RIM101YHL027W CLC1P17891 233 aa7.19□□□□□ -1.26
RIM101YHL027W TCB2P48231 1178 aa7.19□□□□□ -1.26
RIM101YHL027W IOC4Q04213 475 aa7.19□□□□□ -1.26
RIM101YHL027W IRC20Q06554 1556 aa7.18□□□□□ -1.26
RIM101YHL027W ULS1Q08562 1619 aa7.18□□□□□ -1.26
RIM101YHL027W CFT1Q06632 1357 aaKnown RBP7.17□□□□□ -1.26
RIM101YHL027W TY1B-DR3Q99231 1755 aa7.16□□□□□ -1.26
RIM101YHL027W LEU3P08638 886 aa7.16□□□□□ -1.26
RIM101YHL027W NUP159P40477 1460 aa7.16□□□□□ -1.26
RIM101YHL027W TOP2P06786 1428 aaKnown RBP7.15□□□□□ -1.27
RIM101YHL027W ESC1Q03661 1658 aaKnown RBP7.15□□□□□ -1.27
RIM101YHL027W TY3B-GQ99315 1547 aa7.14□□□□□ -1.27
RIM101YHL027W MNN4P36044 1178 aa7.14□□□□□ -1.27
RIM101YHL027W RPO31P04051 1460 aa7.12□□□□□ -1.27
RIM101YHL027W OPY1P38271 328 aa7.12□□□□□ -1.27
RIM101YHL027W TY2B-LR1P0C2J3 1770 aa7.12□□□□□ -1.27
RIM101YHL027W TY2B-FP0CX63 1770 aa7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms