Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
LCN1P31025 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
LCN1P31025 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.32■■□□□ 1
LCN1P31025 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LCN1P31025 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LCN1P31025 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LCN1P31025 AC103724.3-201ENST00000564481 992 ntBASIC21.32■■□□□ 1
LCN1P31025 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.32■■□□□ 1
LCN1P31025 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.32■■□□□ 1
LCN1P31025 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LCN1P31025 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LCN1P31025 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LCN1P31025 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LCN1P31025 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.31■■□□□ 1
LCN1P31025 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LCN1P31025 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.31■■□□□ 1
LCN1P31025 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LCN1P31025 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.31■■□□□ 1
LCN1P31025 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LCN1P31025 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LCN1P31025 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCN1P31025 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCN1P31025 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
LCN1P31025 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCN1P31025 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LCN1P31025 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCN1P31025 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LCN1P31025 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.3■■□□□ 1
LCN1P31025 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.3■■□□□ 1
LCN1P31025 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.3■■□□□ 1
LCN1P31025 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.3■■□□□ 1
LCN1P31025 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LCN1P31025 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LCN1P31025 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCN1P31025 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.29■■□□□ 1
LCN1P31025 LINC01124-201ENST00000409786 2117 ntBASIC21.29■■□□□ 1
LCN1P31025 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LCN1P31025 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.29■■□□□ 1
LCN1P31025 AL031848.2-201ENST00000607670 837 ntBASIC21.29■■□□□ 1
LCN1P31025 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LCN1P31025 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCN1P31025 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCN1P31025 KRT8P33-201ENST00000508125 1423 ntBASIC21.29■■□□□ 1
LCN1P31025 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.29■■□□□ 1
LCN1P31025 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCN1P31025 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCN1P31025 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.28■■□□□ 1
LCN1P31025 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCN1P31025 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCN1P31025 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.28■■□□□ 1
LCN1P31025 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.28■■□□□ 1
LCN1P31025 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.28■■□□□ 1
LCN1P31025 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
LCN1P31025 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCN1P31025 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.28■■□□□ 1
LCN1P31025 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.27■■□□□ 1
LCN1P31025 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LCN1P31025 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LCN1P31025 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCN1P31025 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LCN1P31025 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
LCN1P31025 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.27■■□□□ 1
LCN1P31025 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.27■■□□□ 1
LCN1P31025 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCN1P31025 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.27■■□□□ 1
LCN1P31025 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.27■■□□□ 1
LCN1P31025 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LCN1P31025 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LCN1P31025 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LCN1P31025 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LCN1P31025 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.27■□□□□ 0.99
LCN1P31025 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
LCN1P31025 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LCN1P31025 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCN1P31025 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LCN1P31025 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCN1P31025 AL022069.1-201ENST00000568025 1636 ntBASIC21.26■□□□□ 0.99
LCN1P31025 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCN1P31025 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.25■□□□□ 0.99
LCN1P31025 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCN1P31025 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LCN1P31025 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCN1P31025 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCN1P31025 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.25■□□□□ 0.99
LCN1P31025 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN1P31025 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN1P31025 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
LCN1P31025 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.24■□□□□ 0.99
LCN1P31025 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LCN1P31025 AC137630.3-201ENST00000607245 391 ntBASIC21.24■□□□□ 0.99
LCN1P31025 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN1P31025 AF131216.4-201ENST00000638924 1588 ntBASIC21.23■□□□□ 0.99
LCN1P31025 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCN1P31025 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCN1P31025 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCN1P31025 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCN1P31025 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
LCN1P31025 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LCN1P31025 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LCN1P31025 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms