Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC1P29353 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHC1P29353 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.1■□□□□ 0.97
SHC1P29353 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC1P29353 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC1P29353 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHC1P29353 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.09■□□□□ 0.97
SHC1P29353 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC1P29353 AL031848.2-201ENST00000607670 837 ntBASIC21.09■□□□□ 0.97
SHC1P29353 MIR6089-201ENST00000616698 64 ntBASIC21.09■□□□□ 0.97
SHC1P29353 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SHC1P29353 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC1P29353 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC1P29353 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SHC1P29353 LINC01124-201ENST00000409786 2117 ntBASIC21.08■□□□□ 0.97
SHC1P29353 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SHC1P29353 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SHC1P29353 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC1P29353 KRT18P24-201ENST00000344739 1156 ntBASIC21.08■□□□□ 0.97
SHC1P29353 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.08■□□□□ 0.97
SHC1P29353 AC090877.2-201ENST00000558441 1738 ntBASIC21.08■□□□□ 0.97
SHC1P29353 THA1P-201ENST00000590384 1145 ntBASIC21.08■□□□□ 0.97
SHC1P29353 AL451085.2-201ENST00000605085 799 ntBASIC21.08■□□□□ 0.97
SHC1P29353 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SHC1P29353 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SHC1P29353 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SHC1P29353 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SHC1P29353 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.07■□□□□ 0.96
SHC1P29353 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC1P29353 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.07■□□□□ 0.96
SHC1P29353 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.07■□□□□ 0.96
SHC1P29353 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
SHC1P29353 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.07■□□□□ 0.96
SHC1P29353 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC1P29353 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.07■□□□□ 0.96
SHC1P29353 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHC1P29353 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC1P29353 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
SHC1P29353 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHC1P29353 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SHC1P29353 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SHC1P29353 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHC1P29353 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHC1P29353 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.06■□□□□ 0.96
SHC1P29353 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SHC1P29353 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.05■□□□□ 0.96
SHC1P29353 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHC1P29353 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SHC1P29353 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SHC1P29353 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.04■□□□□ 0.96
SHC1P29353 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.04■□□□□ 0.96
SHC1P29353 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC1P29353 AC011551.1-201ENST00000614101 683 ntBASIC21.04■□□□□ 0.96
SHC1P29353 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.04■□□□□ 0.96
SHC1P29353 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
SHC1P29353 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC1P29353 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC1P29353 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC1P29353 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC1P29353 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC1P29353 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHC1P29353 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC1P29353 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC1P29353 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC1P29353 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.03■□□□□ 0.96
SHC1P29353 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.03■□□□□ 0.96
SHC1P29353 MIR4281-201ENST00000580852 62 ntBASIC21.03■□□□□ 0.96
SHC1P29353 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SHC1P29353 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.03■□□□□ 0.96
SHC1P29353 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
SHC1P29353 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.03■□□□□ 0.96
SHC1P29353 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SHC1P29353 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.03■□□□□ 0.96
SHC1P29353 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.02■□□□□ 0.96
SHC1P29353 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHC1P29353 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHC1P29353 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHC1P29353 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.02■□□□□ 0.96
SHC1P29353 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHC1P29353 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SHC1P29353 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.01■□□□□ 0.95
SHC1P29353 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHC1P29353 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.01■□□□□ 0.95
SHC1P29353 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC1P29353 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.01■□□□□ 0.95
SHC1P29353 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHC1P29353 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHC1P29353 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC1P29353 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.01■□□□□ 0.95
SHC1P29353 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC1P29353 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC1P29353 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHC1P29353 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21■□□□□ 0.95
SHC1P29353 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21■□□□□ 0.95
SHC1P29353 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SHC1P29353 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHC1P29353 AC009299.2-201ENST00000482477 511 ntBASIC21■□□□□ 0.95
SHC1P29353 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21■□□□□ 0.95
SHC1P29353 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21■□□□□ 0.95
SHC1P29353 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms