Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL3P19876 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CXCL3P19876 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CXCL3P19876 AC108673.1-201ENST00000510422 1159 ntBASIC19.42■□□□□ 0.7
CXCL3P19876 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CXCL3P19876 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL3P19876 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL3P19876 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL3P19876 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL3P19876 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL3P19876 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL3P19876 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.42■□□□□ 0.7
CXCL3P19876 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CXCL3P19876 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL3P19876 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCL3P19876 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL3P19876 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL3P19876 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL3P19876 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL3P19876 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.41■□□□□ 0.7
CXCL3P19876 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.41■□□□□ 0.7
CXCL3P19876 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.41■□□□□ 0.7
CXCL3P19876 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL3P19876 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL3P19876 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.41■□□□□ 0.7
CXCL3P19876 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL3P19876 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CXCL3P19876 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CXCL3P19876 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.41■□□□□ 0.7
CXCL3P19876 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCL3P19876 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CXCL3P19876 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCL3P19876 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CXCL3P19876 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCL3P19876 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CXCL3P19876 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.4■□□□□ 0.7
CXCL3P19876 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCL3P19876 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CXCL3P19876 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.39■□□□□ 0.7
CXCL3P19876 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CXCL3P19876 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CXCL3P19876 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.39■□□□□ 0.69
CXCL3P19876 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL3P19876 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL3P19876 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.39■□□□□ 0.69
CXCL3P19876 MIR6089-201ENST00000616698 64 ntBASIC19.39■□□□□ 0.69
CXCL3P19876 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL3P19876 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL3P19876 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL3P19876 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL3P19876 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.39■□□□□ 0.69
CXCL3P19876 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL3P19876 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL3P19876 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL3P19876 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL3P19876 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL3P19876 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.38■□□□□ 0.69
CXCL3P19876 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.38■□□□□ 0.69
CXCL3P19876 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.38■□□□□ 0.69
CXCL3P19876 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL3P19876 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL3P19876 ANOS2P-203ENST00000472227 1816 ntBASIC19.37■□□□□ 0.69
CXCL3P19876 HLA-L-211ENST00000482052 1765 ntBASIC19.37■□□□□ 0.69
CXCL3P19876 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CXCL3P19876 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL3P19876 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.37■□□□□ 0.69
CXCL3P19876 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL3P19876 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL3P19876 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CXCL3P19876 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL3P19876 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL3P19876 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL3P19876 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCL3P19876 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.35■□□□□ 0.69
CXCL3P19876 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCL3P19876 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCL3P19876 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CXCL3P19876 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CXCL3P19876 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CXCL3P19876 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CXCL3P19876 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CXCL3P19876 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CXCL3P19876 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CXCL3P19876 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CXCL3P19876 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CXCL3P19876 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.34■□□□□ 0.69
CXCL3P19876 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CXCL3P19876 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CXCL3P19876 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CXCL3P19876 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CXCL3P19876 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CXCL3P19876 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CXCL3P19876 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CXCL3P19876 AL121603.2-201ENST00000557373 2117 ntBASIC19.33■□□□□ 0.69
CXCL3P19876 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.33■□□□□ 0.68
CXCL3P19876 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.33■□□□□ 0.68
CXCL3P19876 SUZ12P1-203ENST00000578195 985 ntBASIC19.33■□□□□ 0.68
CXCL3P19876 AC005559.1-201ENST00000589661 871 ntBASIC19.33■□□□□ 0.68
CXCL3P19876 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CXCL3P19876 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms