Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN1P07384 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN1P07384 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.65■■□□□ 1.22
CAPN1P07384 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN1P07384 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN1P07384 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN1P07384 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN1P07384 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CAPN1P07384 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.64■■□□□ 1.22
CAPN1P07384 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CAPN1P07384 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
CAPN1P07384 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
CAPN1P07384 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CAPN1P07384 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CAPN1P07384 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CAPN1P07384 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CAPN1P07384 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.64■■□□□ 1.21
CAPN1P07384 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CAPN1P07384 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.64■■□□□ 1.21
CAPN1P07384 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CAPN1P07384 HLA-L-211ENST00000482052 1765 ntBASIC22.63■■□□□ 1.21
CAPN1P07384 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CAPN1P07384 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CAPN1P07384 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CAPN1P07384 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CAPN1P07384 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CAPN1P07384 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.62■■□□□ 1.21
CAPN1P07384 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.62■■□□□ 1.21
CAPN1P07384 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CAPN1P07384 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CAPN1P07384 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CAPN1P07384 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CAPN1P07384 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CAPN1P07384 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.61■■□□□ 1.21
CAPN1P07384 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.61■■□□□ 1.21
CAPN1P07384 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CAPN1P07384 AC004812.2-201ENST00000611079 2094 ntBASIC22.61■■□□□ 1.21
CAPN1P07384 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CAPN1P07384 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CAPN1P07384 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.61■■□□□ 1.21
CAPN1P07384 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.61■■□□□ 1.21
CAPN1P07384 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.61■■□□□ 1.21
CAPN1P07384 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CAPN1P07384 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CAPN1P07384 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.61■■□□□ 1.21
CAPN1P07384 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.6■■□□□ 1.21
CAPN1P07384 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CAPN1P07384 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CAPN1P07384 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CAPN1P07384 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CAPN1P07384 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
CAPN1P07384 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.6■■□□□ 1.21
CAPN1P07384 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.6■■□□□ 1.21
CAPN1P07384 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
CAPN1P07384 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CAPN1P07384 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CAPN1P07384 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CAPN1P07384 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CAPN1P07384 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CAPN1P07384 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CAPN1P07384 GUSBP5-201ENST00000418136 578 ntBASIC22.59■■□□□ 1.21
CAPN1P07384 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CAPN1P07384 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CAPN1P07384 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CAPN1P07384 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CAPN1P07384 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.58■■□□□ 1.21
CAPN1P07384 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CAPN1P07384 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CAPN1P07384 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CAPN1P07384 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CAPN1P07384 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CAPN1P07384 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.57■■□□□ 1.2
CAPN1P07384 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.57■■□□□ 1.2
CAPN1P07384 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CAPN1P07384 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CAPN1P07384 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CAPN1P07384 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CAPN1P07384 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CAPN1P07384 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CAPN1P07384 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CAPN1P07384 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.56■■□□□ 1.2
CAPN1P07384 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.56■■□□□ 1.2
CAPN1P07384 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CAPN1P07384 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CAPN1P07384 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CAPN1P07384 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CAPN1P07384 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CAPN1P07384 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CAPN1P07384 AC022616.5-201ENST00000518796 181 ntBASIC22.55■■□□□ 1.2
CAPN1P07384 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.55■■□□□ 1.2
CAPN1P07384 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CAPN1P07384 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CAPN1P07384 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CAPN1P07384 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CAPN1P07384 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CAPN1P07384 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.54■■□□□ 1.2
CAPN1P07384 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.54■■□□□ 1.2
CAPN1P07384 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CAPN1P07384 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.54■■□□□ 1.2
CAPN1P07384 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms