Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.62■□□□□ 0.89
HLA-DQA2P01906 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQA2P01906 DUX4L9-201ENST00000449051 1259 ntBASIC20.62■□□□□ 0.89
HLA-DQA2P01906 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQA2P01906 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.62■□□□□ 0.89
HLA-DQA2P01906 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQA2P01906 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQA2P01906 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQA2P01906 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HLA-DQA2P01906 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQA2P01906 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQA2P01906 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQA2P01906 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HLA-DQA2P01906 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HLA-DQA2P01906 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HLA-DQA2P01906 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQA2P01906 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQA2P01906 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.61■□□□□ 0.89
HLA-DQA2P01906 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQA2P01906 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA2P01906 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA2P01906 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA2P01906 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA2P01906 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA2P01906 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
HLA-DQA2P01906 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.59■□□□□ 0.89
HLA-DQA2P01906 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DQA2P01906 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA2P01906 AC087393.1-201ENST00000582896 145 ntBASIC20.59■□□□□ 0.89
HLA-DQA2P01906 U85056.1-201ENST00000616429 682 ntBASIC20.59■□□□□ 0.89
HLA-DQA2P01906 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA2P01906 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DQA2P01906 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQA2P01906 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DQA2P01906 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQA2P01906 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
HLA-DQA2P01906 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DQA2P01906 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQA2P01906 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.58■□□□□ 0.89
HLA-DQA2P01906 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.58■□□□□ 0.89
HLA-DQA2P01906 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
HLA-DQA2P01906 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
HLA-DQA2P01906 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQA2P01906 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 AL592295.1-201ENST00000400984 884 ntBASIC20.57■□□□□ 0.88
HLA-DQA2P01906 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HLA-DQA2P01906 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQA2P01906 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQA2P01906 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
HLA-DQA2P01906 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HLA-DQA2P01906 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQA2P01906 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HLA-DQA2P01906 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-DQA2P01906 PKD1P6-201ENST00000343738 4769 ntBASIC20.56■□□□□ 0.88
HLA-DQA2P01906 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.56■□□□□ 0.88
HLA-DQA2P01906 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQA2P01906 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQA2P01906 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQA2P01906 AC090877.2-201ENST00000558441 1738 ntBASIC20.56■□□□□ 0.88
HLA-DQA2P01906 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.55■□□□□ 0.88
HLA-DQA2P01906 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HLA-DQA2P01906 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQA2P01906 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQA2P01906 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HLA-DQA2P01906 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HLA-DQA2P01906 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DQA2P01906 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.55■□□□□ 0.88
HLA-DQA2P01906 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DQA2P01906 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HLA-DQA2P01906 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.54■□□□□ 0.88
HLA-DQA2P01906 AC129492.7-201ENST00000622992 756 ntBASIC20.54■□□□□ 0.88
HLA-DQA2P01906 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms