Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SUPT3HO75486 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SUPT3HO75486 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
SUPT3HO75486 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SUPT3HO75486 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SUPT3HO75486 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SUPT3HO75486 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
SUPT3HO75486 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
SUPT3HO75486 KRT18P60-201ENST00000312876 1297 ntBASIC22.75■■□□□ 1.23
SUPT3HO75486 AL592295.1-201ENST00000400984 884 ntBASIC22.75■■□□□ 1.23
SUPT3HO75486 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SUPT3HO75486 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SUPT3HO75486 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.75■■□□□ 1.23
SUPT3HO75486 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SUPT3HO75486 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SUPT3HO75486 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.74■■□□□ 1.23
SUPT3HO75486 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SUPT3HO75486 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.74■■□□□ 1.23
SUPT3HO75486 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.74■■□□□ 1.23
SUPT3HO75486 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SUPT3HO75486 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SUPT3HO75486 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SUPT3HO75486 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SUPT3HO75486 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.73■■□□□ 1.23
SUPT3HO75486 AC133561.1-201ENST00000568600 2415 ntBASIC22.73■■□□□ 1.23
SUPT3HO75486 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.73■■□□□ 1.23
SUPT3HO75486 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SUPT3HO75486 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
SUPT3HO75486 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.73■■□□□ 1.23
SUPT3HO75486 AC090877.2-201ENST00000558441 1738 ntBASIC22.73■■□□□ 1.23
SUPT3HO75486 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.73■■□□□ 1.23
SUPT3HO75486 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
SUPT3HO75486 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
SUPT3HO75486 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
SUPT3HO75486 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SUPT3HO75486 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.72■■□□□ 1.23
SUPT3HO75486 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SUPT3HO75486 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
SUPT3HO75486 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SUPT3HO75486 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SUPT3HO75486 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
SUPT3HO75486 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
SUPT3HO75486 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SUPT3HO75486 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SUPT3HO75486 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
SUPT3HO75486 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SUPT3HO75486 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.71■■□□□ 1.23
SUPT3HO75486 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SUPT3HO75486 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SUPT3HO75486 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SUPT3HO75486 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SUPT3HO75486 ABHD17AP5-201ENST00000580133 923 ntBASIC22.7■■□□□ 1.22
SUPT3HO75486 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SUPT3HO75486 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.7■■□□□ 1.22
SUPT3HO75486 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.22
SUPT3HO75486 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SUPT3HO75486 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SUPT3HO75486 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SUPT3HO75486 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.69■■□□□ 1.22
SUPT3HO75486 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.69■■□□□ 1.22
SUPT3HO75486 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.69■■□□□ 1.22
SUPT3HO75486 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
SUPT3HO75486 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SUPT3HO75486 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.69■■□□□ 1.22
SUPT3HO75486 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
SUPT3HO75486 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.69■■□□□ 1.22
SUPT3HO75486 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SUPT3HO75486 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SUPT3HO75486 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SUPT3HO75486 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
SUPT3HO75486 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
SUPT3HO75486 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SUPT3HO75486 LONRF2P2-201ENST00000439212 571 ntBASIC22.68■■□□□ 1.22
SUPT3HO75486 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.68■■□□□ 1.22
SUPT3HO75486 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SUPT3HO75486 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.68■■□□□ 1.22
SUPT3HO75486 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.68■■□□□ 1.22
SUPT3HO75486 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SUPT3HO75486 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SUPT3HO75486 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
SUPT3HO75486 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SUPT3HO75486 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SUPT3HO75486 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SUPT3HO75486 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SUPT3HO75486 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.67■■□□□ 1.22
SUPT3HO75486 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.67■■□□□ 1.22
SUPT3HO75486 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SUPT3HO75486 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.66■■□□□ 1.22
SUPT3HO75486 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SUPT3HO75486 DUX4L18-201ENST00000553347 1267 ntBASIC22.66■■□□□ 1.22
SUPT3HO75486 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.66■■□□□ 1.22
SUPT3HO75486 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
SUPT3HO75486 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SUPT3HO75486 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
SUPT3HO75486 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SUPT3HO75486 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SUPT3HO75486 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.65■■□□□ 1.22
SUPT3HO75486 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.65■■□□□ 1.22
SUPT3HO75486 NTF6A-201ENST00000591175 560 ntBASIC22.65■■□□□ 1.22
SUPT3HO75486 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms