Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF13O43567 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF13O43567 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF13O43567 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF13O43567 AL592295.1-201ENST00000400984 884 ntBASIC20.95■□□□□ 0.94
RNF13O43567 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF13O43567 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF13O43567 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF13O43567 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RNF13O43567 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF13O43567 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF13O43567 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RNF13O43567 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF13O43567 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF13O43567 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF13O43567 AC139795.1-202ENST00000500444 432 ntBASIC20.94■□□□□ 0.94
RNF13O43567 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF13O43567 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF13O43567 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF13O43567 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF13O43567 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
RNF13O43567 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RNF13O43567 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF13O43567 HLA-L-211ENST00000482052 1765 ntBASIC20.93■□□□□ 0.94
RNF13O43567 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF13O43567 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF13O43567 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RNF13O43567 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF13O43567 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF13O43567 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
RNF13O43567 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF13O43567 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF13O43567 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF13O43567 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF13O43567 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF13O43567 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF13O43567 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF13O43567 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF13O43567 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF13O43567 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF13O43567 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
RNF13O43567 LONRF2P2-201ENST00000439212 571 ntBASIC20.92■□□□□ 0.94
RNF13O43567 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF13O43567 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF13O43567 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF13O43567 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF13O43567 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF13O43567 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF13O43567 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RNF13O43567 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF13O43567 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF13O43567 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF13O43567 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF13O43567 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF13O43567 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF13O43567 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF13O43567 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF13O43567 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF13O43567 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF13O43567 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF13O43567 DUSP8P5-201ENST00000422884 1815 ntBASIC20.9■□□□□ 0.94
RNF13O43567 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF13O43567 BHLHE23-202ENST00000612929 1109 ntBASIC20.9■□□□□ 0.94
RNF13O43567 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF13O43567 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RNF13O43567 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF13O43567 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF13O43567 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF13O43567 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RNF13O43567 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF13O43567 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF13O43567 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF13O43567 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF13O43567 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF13O43567 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF13O43567 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF13O43567 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RNF13O43567 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF13O43567 AC090877.2-201ENST00000558441 1738 ntBASIC20.88■□□□□ 0.93
RNF13O43567 AC004987.1-201ENST00000428627 508 ntBASIC20.88■□□□□ 0.93
RNF13O43567 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.88■□□□□ 0.93
RNF13O43567 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RNF13O43567 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
RNF13O43567 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF13O43567 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF13O43567 ATP5G2P3-201ENST00000429083 425 ntBASIC20.87■□□□□ 0.93
RNF13O43567 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RNF13O43567 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RNF13O43567 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF13O43567 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF13O43567 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF13O43567 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF13O43567 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF13O43567 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF13O43567 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RNF13O43567 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF13O43567 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RNF13O43567 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF13O43567 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF13O43567 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms