Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3D21A4FU49 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3D21A4FU49 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.36■■□□□ 1.01
SH3D21A4FU49 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3D21A4FU49 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH3D21A4FU49 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH3D21A4FU49 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SH3D21A4FU49 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH3D21A4FU49 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3D21A4FU49 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.36■■□□□ 1.01
SH3D21A4FU49 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.35■■□□□ 1.01
SH3D21A4FU49 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.35■■□□□ 1.01
SH3D21A4FU49 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3D21A4FU49 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.35■■□□□ 1.01
SH3D21A4FU49 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SH3D21A4FU49 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3D21A4FU49 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3D21A4FU49 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3D21A4FU49 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3D21A4FU49 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3D21A4FU49 AC004812.2-201ENST00000611079 2094 ntBASIC21.34■■□□□ 1.01
SH3D21A4FU49 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.34■■□□□ 1.01
SH3D21A4FU49 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3D21A4FU49 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.34■■□□□ 1.01
SH3D21A4FU49 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SH3D21A4FU49 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SH3D21A4FU49 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH3D21A4FU49 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.33■■□□□ 1.01
SH3D21A4FU49 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.33■■□□□ 1.01
SH3D21A4FU49 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3D21A4FU49 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH3D21A4FU49 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3D21A4FU49 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SH3D21A4FU49 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SH3D21A4FU49 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SH3D21A4FU49 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SH3D21A4FU49 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH3D21A4FU49 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SH3D21A4FU49 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.32■■□□□ 1
SH3D21A4FU49 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.32■■□□□ 1
SH3D21A4FU49 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SH3D21A4FU49 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SH3D21A4FU49 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH3D21A4FU49 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH3D21A4FU49 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH3D21A4FU49 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.31■■□□□ 1
SH3D21A4FU49 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH3D21A4FU49 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH3D21A4FU49 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
SH3D21A4FU49 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SH3D21A4FU49 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.3■■□□□ 1
SH3D21A4FU49 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SH3D21A4FU49 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SH3D21A4FU49 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.29■■□□□ 1
SH3D21A4FU49 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH3D21A4FU49 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3D21A4FU49 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
SH3D21A4FU49 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.29■■□□□ 1
SH3D21A4FU49 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3D21A4FU49 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.29■■□□□ 1
SH3D21A4FU49 AC103834.1-201ENST00000520383 144 ntBASIC21.29■■□□□ 1
SH3D21A4FU49 PVT1_1.1-201ENST00000615125 194 ntBASIC21.29■■□□□ 1
SH3D21A4FU49 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.29■■□□□ 1
SH3D21A4FU49 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3D21A4FU49 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3D21A4FU49 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SH3D21A4FU49 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SH3D21A4FU49 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.28■■□□□ 1
SH3D21A4FU49 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
SH3D21A4FU49 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.28■■□□□ 1
SH3D21A4FU49 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3D21A4FU49 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3D21A4FU49 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.27■■□□□ 1
SH3D21A4FU49 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3D21A4FU49 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3D21A4FU49 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SH3D21A4FU49 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
SH3D21A4FU49 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.27■■□□□ 1
SH3D21A4FU49 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
SH3D21A4FU49 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.27■■□□□ 1
SH3D21A4FU49 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SH3D21A4FU49 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SH3D21A4FU49 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3D21A4FU49 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3D21A4FU49 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SH3D21A4FU49 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.26■□□□□ 0.99
SH3D21A4FU49 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SH3D21A4FU49 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.26■□□□□ 0.99
SH3D21A4FU49 AC009299.2-201ENST00000482477 511 ntBASIC21.26■□□□□ 0.99
SH3D21A4FU49 MIR4508-201ENST00000584178 70 ntBASIC21.26■□□□□ 0.99
SH3D21A4FU49 MIR6089-201ENST00000616698 64 ntBASIC21.26■□□□□ 0.99
SH3D21A4FU49 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3D21A4FU49 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3D21A4FU49 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3D21A4FU49 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.26■□□□□ 0.99
SH3D21A4FU49 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3D21A4FU49 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3D21A4FU49 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3D21A4FU49 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3D21A4FU49 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms