Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
A0A1W2PRF3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
A0A1W2PRF3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.92■□□□□ 0.62
A0A1W2PRF3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
A0A1W2PRF3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.92■□□□□ 0.62
A0A1W2PRF3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
A0A1W2PRF3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
A0A1W2PRF3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
A0A1W2PRF3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
A0A1W2PRF3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A0A1W2PRF3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A0A1W2PRF3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A0A1W2PRF3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A0A1W2PRF3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
A0A1W2PRF3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
A0A1W2PRF3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
A0A1W2PRF3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
A0A1W2PRF3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
A0A1W2PRF3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.9■□□□□ 0.62
A0A1W2PRF3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
A0A1W2PRF3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
A0A1W2PRF3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
A0A1W2PRF3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.9■□□□□ 0.62
A0A1W2PRF3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.9■□□□□ 0.62
A0A1W2PRF3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.9■□□□□ 0.62
A0A1W2PRF3 MTDHP2-201ENST00000601468 714 ntBASIC18.9■□□□□ 0.62
A0A1W2PRF3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
A0A1W2PRF3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
A0A1W2PRF3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
A0A1W2PRF3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
A0A1W2PRF3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
A0A1W2PRF3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
A0A1W2PRF3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.89■□□□□ 0.61
A0A1W2PRF3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
A0A1W2PRF3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.89■□□□□ 0.61
A0A1W2PRF3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
A0A1W2PRF3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.89■□□□□ 0.61
A0A1W2PRF3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
A0A1W2PRF3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.89■□□□□ 0.61
A0A1W2PRF3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
A0A1W2PRF3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
A0A1W2PRF3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
A0A1W2PRF3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.88■□□□□ 0.61
A0A1W2PRF3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
A0A1W2PRF3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.88■□□□□ 0.61
A0A1W2PRF3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.88■□□□□ 0.61
A0A1W2PRF3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
A0A1W2PRF3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.88■□□□□ 0.61
A0A1W2PRF3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
A0A1W2PRF3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
A0A1W2PRF3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.88■□□□□ 0.61
A0A1W2PRF3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
A0A1W2PRF3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
A0A1W2PRF3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
A0A1W2PRF3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
A0A1W2PRF3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
A0A1W2PRF3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
A0A1W2PRF3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.87■□□□□ 0.61
A0A1W2PRF3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
A0A1W2PRF3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
A0A1W2PRF3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
A0A1W2PRF3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
A0A1W2PRF3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.87■□□□□ 0.61
A0A1W2PRF3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
A0A1W2PRF3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.87■□□□□ 0.61
A0A1W2PRF3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.87■□□□□ 0.61
A0A1W2PRF3 AC010997.5-201ENST00000609182 354 ntBASIC18.87■□□□□ 0.61
A0A1W2PRF3 MIR6089-201ENST00000616698 64 ntBASIC18.87■□□□□ 0.61
A0A1W2PRF3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.87■□□□□ 0.61
A0A1W2PRF3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
A0A1W2PRF3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
A0A1W2PRF3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
A0A1W2PRF3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
A0A1W2PRF3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
A0A1W2PRF3 AC138932.3-201ENST00000567634 1902 ntBASIC18.86■□□□□ 0.61
A0A1W2PRF3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
A0A1W2PRF3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
A0A1W2PRF3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
A0A1W2PRF3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
A0A1W2PRF3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
A0A1W2PRF3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.85■□□□□ 0.61
A0A1W2PRF3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.85■□□□□ 0.61
A0A1W2PRF3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.85■□□□□ 0.61
A0A1W2PRF3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
A0A1W2PRF3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.85■□□□□ 0.61
A0A1W2PRF3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.85■□□□□ 0.61
A0A1W2PRF3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
A0A1W2PRF3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
A0A1W2PRF3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
A0A1W2PRF3 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.84■□□□□ 0.61
A0A1W2PRF3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.84■□□□□ 0.61
A0A1W2PRF3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
A0A1W2PRF3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.84■□□□□ 0.61
A0A1W2PRF3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.84■□□□□ 0.61
A0A1W2PRF3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
A0A1W2PRF3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
A0A1W2PRF3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
A0A1W2PRF3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.83■□□□□ 0.61
A0A1W2PRF3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.83■□□□□ 0.6
A0A1W2PRF3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms