Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV3A0A0B4J244 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRAV3A0A0B4J244 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV3A0A0B4J244 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.58■□□□□ 0.56
TRAV3A0A0B4J244 DUX4L9-201ENST00000449051 1259 ntBASIC18.58■□□□□ 0.56
TRAV3A0A0B4J244 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV3A0A0B4J244 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV3A0A0B4J244 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV3A0A0B4J244 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV3A0A0B4J244 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV3A0A0B4J244 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV3A0A0B4J244 AC087393.1-201ENST00000582896 145 ntBASIC18.57■□□□□ 0.56
TRAV3A0A0B4J244 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV3A0A0B4J244 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV3A0A0B4J244 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV3A0A0B4J244 C9orf163-202ENST00000624034 2573 ntBASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 MIR6765-201ENST00000614092 87 ntBASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 AC090877.2-201ENST00000558441 1738 ntBASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV3A0A0B4J244 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 RARRES2P2-201ENST00000394842 485 ntBASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 U85056.1-201ENST00000616429 682 ntBASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV3A0A0B4J244 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV3A0A0B4J244 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV3A0A0B4J244 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TRAV3A0A0B4J244 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV3A0A0B4J244 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRAV3A0A0B4J244 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV3A0A0B4J244 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV3A0A0B4J244 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV3A0A0B4J244 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV3A0A0B4J244 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV3A0A0B4J244 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV3A0A0B4J244 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRAV3A0A0B4J244 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV3A0A0B4J244 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV3A0A0B4J244 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.52■□□□□ 0.56
TRAV3A0A0B4J244 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV3A0A0B4J244 AL592295.1-201ENST00000400984 884 ntBASIC18.52■□□□□ 0.56
TRAV3A0A0B4J244 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.52■□□□□ 0.56
TRAV3A0A0B4J244 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV3A0A0B4J244 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV3A0A0B4J244 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
TRAV3A0A0B4J244 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV3A0A0B4J244 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV3A0A0B4J244 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRAV3A0A0B4J244 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV3A0A0B4J244 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRAV3A0A0B4J244 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV3A0A0B4J244 AC012676.1-201ENST00000574705 1949 ntBASIC18.51■□□□□ 0.55
TRAV3A0A0B4J244 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV3A0A0B4J244 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAV3A0A0B4J244 HSD17B1P1-201ENST00000590052 955 ntBASIC18.51■□□□□ 0.55
TRAV3A0A0B4J244 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV3A0A0B4J244 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV3A0A0B4J244 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRAV3A0A0B4J244 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV3A0A0B4J244 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV3A0A0B4J244 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms