Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 AC004449.1-201ENST00000564240 433 ntBASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 AC105021.1-202ENST00000570572 669 ntBASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 LINC00628-201ENST00000628516 1289 ntBASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
HHLA3Q9XRX5 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 CYP4F24P-201ENST00000586049 1580 ntBASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 KRT8P37-201ENST00000451609 1420 ntBASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 GPS2P2-201ENST00000430745 888 ntBASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 SPDYE14P-201ENST00000442619 822 ntBASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 AC025678.2-201ENST00000562061 970 ntBASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 MIR4453-201ENST00000584019 89 ntBASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms