Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 AP005019.2-201ENST00000615104 511 ntBASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 AC018665.1-201ENST00000622927 1362 ntBASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 LINC00554-201ENST00000564841 3011 ntBASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKKSQ9NPJ1 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 AC134312.5-201ENST00000568031 1313 ntBASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 AC079776.1-201ENST00000401540 1152 ntBASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 ARSEP1-201ENST00000420443 635 ntBASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 AC112492.5-201ENST00000421897 457 ntBASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 AC244107.1-201ENST00000442033 332 ntBASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 ATP5G2P4-201ENST00000442175 420 ntBASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 ACA64.2-201ENST00000459014 129 ntBASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 KRT18P25-201ENST00000508931 1278 ntBASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 IGHV3-71-201ENST00000523324 359 ntBASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 HILS1-202ENST00000545329 423 ntBASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 AC017083.2-201ENST00000608069 979 ntBASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.53□□□□□ -0.08
MKKSQ9NPJ1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 PPT1-215ENST00000641471 2368 ntBASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 AC136621.1-201ENST00000624017 2304 ntBASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.52□□□□□ -0.08
MKKSQ9NPJ1 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
MKKSQ9NPJ1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
MKKSQ9NPJ1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MKKSQ9NPJ1 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MKKSQ9NPJ1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MKKSQ9NPJ1 AL645937.2-201ENST00000396808 931 ntBASIC14.52□□□□□ -0.09
MKKSQ9NPJ1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms