Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 AC005089.1-201ENST00000619486 2241 ntBASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 AC007191.1-201ENST00000623179 2995 ntBASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 KLF2P3-201ENST00000451977 1087 ntBASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 AC069120.2-201ENST00000524091 540 ntBASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 SNX18-202ENST00000343017 3140 ntBASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRTM1Q9HBL6 AL359258.3-201ENST00000622910 2331 ntBASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 AC027369.6-201ENST00000525520 931 ntBASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 AC044860.1-202ENST00000559481 777 ntBASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 AC025678.2-201ENST00000562061 970 ntBASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 AC004449.1-201ENST00000564240 433 ntBASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 AC005912.2-201ENST00000619492 2400 ntBASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 AC140479.7-201ENST00000636301 2332 ntBASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
LRTM1Q9HBL6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
LRTM1Q9HBL6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms