Protein–RNA interactions for Protein: Q9HBH1

PDF, Peptide deformylase, mitochondrial, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDFQ9HBH1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDFQ9HBH1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDFQ9HBH1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDFQ9HBH1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PDFQ9HBH1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.4■□□□□ 0.06
PDFQ9HBH1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDFQ9HBH1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDFQ9HBH1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDFQ9HBH1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDFQ9HBH1 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDFQ9HBH1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDFQ9HBH1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDFQ9HBH1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDFQ9HBH1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDFQ9HBH1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDFQ9HBH1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDFQ9HBH1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDFQ9HBH1 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDFQ9HBH1 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDFQ9HBH1 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 FAM197Y7-201ENST00000432892 766 ntBASIC15.39■□□□□ 0.05
PDFQ9HBH1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 C2orf27AP3-201ENST00000434123 579 ntBASIC15.39■□□□□ 0.05
PDFQ9HBH1 AC245100.3-201ENST00000441281 285 ntBASIC15.39■□□□□ 0.05
PDFQ9HBH1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 AL590640.2-201ENST00000457038 527 ntBASIC15.39■□□□□ 0.05
PDFQ9HBH1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 AP000812.2-201ENST00000538934 718 ntBASIC15.39■□□□□ 0.05
PDFQ9HBH1 HILS1-202ENST00000545329 423 ntBASIC15.39■□□□□ 0.05
PDFQ9HBH1 SNX29P1-201ENST00000548357 1007 ntBASIC15.39■□□□□ 0.05
PDFQ9HBH1 AL354718.3-201ENST00000616414 581 ntBASIC15.39■□□□□ 0.05
PDFQ9HBH1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 CR382287.1-201ENST00000623954 586 ntBASIC15.39■□□□□ 0.05
PDFQ9HBH1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDFQ9HBH1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDFQ9HBH1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDFQ9HBH1 TNRC18P2-201ENST00000417666 2714 ntBASIC15.39■□□□□ 0.05
PDFQ9HBH1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDFQ9HBH1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.39■□□□□ 0.05
PDFQ9HBH1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 BOLA2P3-201ENST00000404566 256 ntBASIC15.38■□□□□ 0.05
PDFQ9HBH1 MIR1909-201ENST00000411312 80 ntBASIC15.38■□□□□ 0.05
PDFQ9HBH1 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 GPR53P-205ENST00000457298 1084 ntBASIC15.38■□□□□ 0.05
PDFQ9HBH1 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 AC011270.2-201ENST00000624293 2550 ntBASIC15.38■□□□□ 0.05
PDFQ9HBH1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
PDFQ9HBH1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDFQ9HBH1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PDFQ9HBH1 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDFQ9HBH1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDFQ9HBH1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PDFQ9HBH1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDFQ9HBH1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms