Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 LINC02228-204ENST00000642115 2962 ntBASIC14.6□□□□□ -0.07
BBS4Q96RK4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 MROH4P-201ENST00000431302 1578 ntBASIC14.6□□□□□ -0.07
BBS4Q96RK4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 GHSR-202ENST00000427970 912 ntBASIC14.59□□□□□ -0.07
BBS4Q96RK4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 RFPL4AP1-201ENST00000530883 850 ntBASIC14.59□□□□□ -0.07
BBS4Q96RK4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 SRD5A3P1-201ENST00000603021 949 ntBASIC14.59□□□□□ -0.07
BBS4Q96RK4 AC008738.7-201ENST00000609744 511 ntBASIC14.59□□□□□ -0.07
BBS4Q96RK4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
BBS4Q96RK4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BBS4Q96RK4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.58□□□□□ -0.07
BBS4Q96RK4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
BBS4Q96RK4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
BBS4Q96RK4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
BBS4Q96RK4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.58□□□□□ -0.07
BBS4Q96RK4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
BBS4Q96RK4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
BBS4Q96RK4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
BBS4Q96RK4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.58□□□□□ -0.07
BBS4Q96RK4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.58□□□□□ -0.08
BBS4Q96RK4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BBS4Q96RK4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BBS4Q96RK4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
BBS4Q96RK4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BBS4Q96RK4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
BBS4Q96RK4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.58□□□□□ -0.08
BBS4Q96RK4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BBS4Q96RK4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BBS4Q96RK4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BBS4Q96RK4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.58□□□□□ -0.08
BBS4Q96RK4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
BBS4Q96RK4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.58□□□□□ -0.08
BBS4Q96RK4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.58□□□□□ -0.08
BBS4Q96RK4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.58□□□□□ -0.08
BBS4Q96RK4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.58□□□□□ -0.08
BBS4Q96RK4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
BBS4Q96RK4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms