Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS33AQ96AX1 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.8□□□□□ -0.04
VPS33AQ96AX1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 SPDYE17-201ENST00000412399 783 ntBASIC14.8□□□□□ -0.04
VPS33AQ96AX1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 AC018529.1-201ENST00000613063 361 ntBASIC14.8□□□□□ -0.04
VPS33AQ96AX1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.8□□□□□ -0.04
VPS33AQ96AX1 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 ST20-AS1-201ENST00000560255 4223 ntBASIC14.8□□□□□ -0.04
VPS33AQ96AX1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS33AQ96AX1 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 FAM58DP-201ENST00000428076 619 ntBASIC14.79□□□□□ -0.04
VPS33AQ96AX1 HTR5BP-201ENST00000430851 1154 ntBASIC14.79□□□□□ -0.04
VPS33AQ96AX1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 AC005237.2-201ENST00000434368 219 ntBASIC14.79□□□□□ -0.04
VPS33AQ96AX1 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.79□□□□□ -0.04
VPS33AQ96AX1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 BX640514.1-201ENST00000583223 1918 ntBASIC14.79□□□□□ -0.04
VPS33AQ96AX1 AC011467.4-201ENST00000594891 528 ntBASIC14.79□□□□□ -0.04
VPS33AQ96AX1 AC022145.2-201ENST00000598203 171 ntBASIC14.79□□□□□ -0.04
VPS33AQ96AX1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 AC003101.2-201ENST00000612557 442 ntBASIC14.79□□□□□ -0.04
VPS33AQ96AX1 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS33AQ96AX1 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms