Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 AC041040.2-201ENST00000622926 2899 ntBASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 AKAP8P1-201ENST00000434743 1349 ntBASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 AC027307.2-201ENST00000591252 911 ntBASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 AL139385.1-201ENST00000611744 3272 ntBASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRIM42Q8IWZ5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 HLA-H-201ENST00000383620 1096 ntBASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM42Q8IWZ5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms