Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 SCARNA2-201ENST00000458748 420 ntBASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 IGHV3-65-201ENST00000523210 341 ntBASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 OR7E47P-204ENST00000575924 449 ntBASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 AC008608.2-201ENST00000606089 416 ntBASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 RPL5P21-201ENST00000404620 815 ntBASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 GPX1P2-201ENST00000429271 606 ntBASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 AP000550.4-202ENST00000639755 178 ntBASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD2Q8IV50 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 AL589702.1-201ENST00000641229 1509 ntBASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 KRT8P22-201ENST00000562317 1415 ntBASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
LYSMD2Q8IV50 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms