Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 AL137783.1-201ENST00000623494 1896 ntBASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 CICP11-201ENST00000434745 2827 ntBASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 LTB4R2-202ENST00000528054 3092 ntBASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 PUDPP3-201ENST00000445368 636 ntBASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 AC012618.1-201ENST00000461223 412 ntBASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 MIR4722-201ENST00000578292 60 ntBASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS4Q8IUM7 REXO1L4P-201ENST00000605109 1937 ntBASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 FTLP1-201ENST00000449155 526 ntBASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 AC125604.1-201ENST00000496255 707 ntBASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 AL353726.2-201ENST00000623259 884 ntBASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 AC079336.7-201ENST00000623428 1078 ntBASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 AC011840.2-201ENST00000563063 1520 ntBASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 AC009093.2-202ENST00000620513 2079 ntBASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 AP005117.1-202ENST00000581724 1908 ntBASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 PRAL-201ENST00000624952 3286 ntBASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS4Q8IUM7 AC012508.2-201ENST00000567613 1472 ntBASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 E2F3P2-201ENST00000447755 1422 ntBASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
NPAS4Q8IUM7 AL157791.1-201ENST00000553667 1699 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms