Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 AC092135.3-201ENST00000624151 1846 ntBASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 AL161772.1-201ENST00000610494 4412 ntBASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 AC069120.2-201ENST00000524091 540 ntBASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 MIR4492-201ENST00000581627 80 ntBASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
FOXR1Q6PIV2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 AC023024.2-201ENST00000623561 1993 ntBASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 OR2I1P-210ENST00000642037 4691 ntBASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 MIR661-201ENST00000384842 89 ntBASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 SPDYE14P-201ENST00000442619 822 ntBASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms