Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 AL138725.1-201ENST00000407347 1314 ntBASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 AC239868.1-201ENST00000369385 493 ntBASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 SCARNA21-201ENST00000517026 139 ntBASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 AL805961.1-201ENST00000642026 753 ntBASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CNKSR3Q6P9H4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 AC024909.3-201ENST00000611513 2257 ntBASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 PGAM1P5-201ENST00000548011 764 ntBASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 AC005962.1-201ENST00000584100 773 ntBASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 AC051619.9-201ENST00000623237 597 ntBASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 Z98259.2-201ENST00000641583 609 ntBASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNKSR3Q6P9H4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNKSR3Q6P9H4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms