Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SAMD11P1-201ENST00000571429 661 ntBASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF549Q6P9A3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 GNAQP1-201ENST00000444815 1067 ntBASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 DOC2GP-202ENST00000514950 1163 ntBASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 AL662799.1-202ENST00000614205 422 ntBASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF549Q6P9A3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 FAM45BP-202ENST00000592932 1624 ntBASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 CICP14-201ENST00000629111 2732 ntBASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 SPDYE19P-201ENST00000338590 713 ntBASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 FAM86LP-201ENST00000478302 853 ntBASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 DRD5P1-201ENST00000456605 1438 ntBASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF549Q6P9A3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms