Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 PHBP15-201ENST00000574228 665 ntBASIC18.95■□□□□ 0.62
RC3H1Q5TC82 MIR4649-201ENST00000582839 64 ntBASIC18.95■□□□□ 0.62
RC3H1Q5TC82 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 RPL13AP19-201ENST00000434320 584 ntBASIC18.94■□□□□ 0.62
RC3H1Q5TC82 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 AL645933.1-201ENST00000440087 609 ntBASIC18.94■□□□□ 0.62
RC3H1Q5TC82 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 AC006122.1-201ENST00000493323 440 ntBASIC18.94■□□□□ 0.62
RC3H1Q5TC82 CTBP2P4-201ENST00000513884 920 ntBASIC18.94■□□□□ 0.62
RC3H1Q5TC82 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 FRMPD2B-201ENST00000431305 1347 ntBASIC18.94■□□□□ 0.62
RC3H1Q5TC82 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RC3H1Q5TC82 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 AL592076.1-201ENST00000424448 303 ntBASIC18.93■□□□□ 0.62
RC3H1Q5TC82 RPL8P2-201ENST00000430538 502 ntBASIC18.93■□□□□ 0.62
RC3H1Q5TC82 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 AL035414.1-201ENST00000451327 857 ntBASIC18.93■□□□□ 0.62
RC3H1Q5TC82 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 AC005632.3-201ENST00000605544 308 ntBASIC18.93■□□□□ 0.62
RC3H1Q5TC82 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RC3H1Q5TC82 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 CYP2T1P-202ENST00000641596 2535 ntBASIC18.92■□□□□ 0.62
RC3H1Q5TC82 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms