Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FDFT1P37268 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.67■□□□□ 0.1
FDFT1P37268 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FDFT1P37268 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FDFT1P37268 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.67■□□□□ 0.1
FDFT1P37268 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
FDFT1P37268 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
FDFT1P37268 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FDFT1P37268 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
FDFT1P37268 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.67■□□□□ 0.1
FDFT1P37268 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FDFT1P37268 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FDFT1P37268 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.67■□□□□ 0.1
FDFT1P37268 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.67■□□□□ 0.1
FDFT1P37268 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.67■□□□□ 0.1
FDFT1P37268 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
FDFT1P37268 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FDFT1P37268 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.67■□□□□ 0.1
FDFT1P37268 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
FDFT1P37268 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
FDFT1P37268 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.66■□□□□ 0.1
FDFT1P37268 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
FDFT1P37268 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
FDFT1P37268 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.66■□□□□ 0.1
FDFT1P37268 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.66■□□□□ 0.1
FDFT1P37268 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
FDFT1P37268 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
FDFT1P37268 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.66■□□□□ 0.1
FDFT1P37268 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.66■□□□□ 0.1
FDFT1P37268 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.66■□□□□ 0.1
FDFT1P37268 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.66■□□□□ 0.1
FDFT1P37268 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.66■□□□□ 0.1
FDFT1P37268 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.66■□□□□ 0.1
FDFT1P37268 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.66■□□□□ 0.1
FDFT1P37268 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.66■□□□□ 0.1
FDFT1P37268 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.66■□□□□ 0.1
FDFT1P37268 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.66■□□□□ 0.1
FDFT1P37268 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.66■□□□□ 0.1
FDFT1P37268 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
FDFT1P37268 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
FDFT1P37268 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
FDFT1P37268 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 AC007787.1-201ENST00000588095 1583 ntBASIC15.66■□□□□ 0.1
FDFT1P37268 KRT18P28-201ENST00000453838 1332 ntBASIC15.66■□□□□ 0.1
FDFT1P37268 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.66■□□□□ 0.1
FDFT1P37268 CICP14-201ENST00000629111 2732 ntBASIC15.66■□□□□ 0.1
FDFT1P37268 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FDFT1P37268 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FDFT1P37268 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.65■□□□□ 0.1
FDFT1P37268 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
FDFT1P37268 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.65■□□□□ 0.1
FDFT1P37268 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
FDFT1P37268 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
FDFT1P37268 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FDFT1P37268 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FDFT1P37268 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FDFT1P37268 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FDFT1P37268 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FDFT1P37268 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.65■□□□□ 0.1
FDFT1P37268 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.65■□□□□ 0.1
FDFT1P37268 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
FDFT1P37268 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
FDFT1P37268 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
FDFT1P37268 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
FDFT1P37268 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FDFT1P37268 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FDFT1P37268 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.65■□□□□ 0.1
FDFT1P37268 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.65■□□□□ 0.1
FDFT1P37268 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.65■□□□□ 0.1
FDFT1P37268 METTL21AP1-201ENST00000438852 635 ntBASIC15.65■□□□□ 0.1
FDFT1P37268 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FDFT1P37268 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.65■□□□□ 0.1
FDFT1P37268 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FDFT1P37268 AC009407.1-201ENST00000568958 598 ntBASIC15.65■□□□□ 0.1
FDFT1P37268 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.65■□□□□ 0.1
FDFT1P37268 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms