Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.41□□□□□ -0.1
CHMP24386 AC114501.2-201ENST00000439631 535 ntBASIC14.41□□□□□ -0.1
CHMP24386 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.41□□□□□ -0.1
CHMP24386 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.41□□□□□ -0.1
CHMP24386 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.41□□□□□ -0.1
CHMP24386 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 AC008738.7-201ENST00000609744 511 ntBASIC14.41□□□□□ -0.1
CHMP24386 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CHMP24386 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CHMP24386 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CHMP24386 AC139749.1-202ENST00000617529 3139 ntBASIC14.41□□□□□ -0.1
CHMP24386 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.41□□□□□ -0.1
CHMP24386 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.41□□□□□ -0.1
CHMP24386 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.4□□□□□ -0.1
CHMP24386 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CHMP24386 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CHMP24386 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CHMP24386 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 AC135586.1-201ENST00000539323 574 ntBASIC14.4□□□□□ -0.1
CHMP24386 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CHMP24386 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CHMP24386 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 AC027307.3-201ENST00000594262 1100 ntBASIC14.4□□□□□ -0.1
CHMP24386 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.4□□□□□ -0.1
CHMP24386 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.4□□□□□ -0.1
CHMP24386 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.4□□□□□ -0.1
CHMP24386 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CHMP24386 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.4□□□□□ -0.1
CHMP24386 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHMP24386 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CHMP24386 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP24386 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.39□□□□□ -0.11
CHMP24386 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHMP24386 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.39□□□□□ -0.11
CHMP24386 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.39□□□□□ -0.11
CHMP24386 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHMP24386 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CHMP24386 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.39□□□□□ -0.11
CHMP24386 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHMP24386 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CHMP24386 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms