Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MSR1P21757 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MSR1P21757 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
MSR1P21757 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MSR1P21757 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
MSR1P21757 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
MSR1P21757 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.59□□□□□ -0.23
MSR1P21757 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
MSR1P21757 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 AC104457.1-201ENST00000401024 814 ntBASIC13.59□□□□□ -0.23
MSR1P21757 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.59□□□□□ -0.23
MSR1P21757 MRPS18AP1-201ENST00000414458 589 ntBASIC13.59□□□□□ -0.23
MSR1P21757 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.59□□□□□ -0.23
MSR1P21757 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.59□□□□□ -0.23
MSR1P21757 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.59□□□□□ -0.23
MSR1P21757 DOC2GP-202ENST00000514950 1163 ntBASIC13.59□□□□□ -0.23
MSR1P21757 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.59□□□□□ -0.23
MSR1P21757 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 TPRX2P-201ENST00000535362 881 ntBASIC13.59□□□□□ -0.23
MSR1P21757 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
MSR1P21757 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
MSR1P21757 RARRES2P5-201ENST00000564013 466 ntBASIC13.59□□□□□ -0.23
MSR1P21757 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.59□□□□□ -0.23
MSR1P21757 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.59□□□□□ -0.23
MSR1P21757 AL391069.4-201ENST00000609583 481 ntBASIC13.59□□□□□ -0.23
MSR1P21757 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.59□□□□□ -0.23
MSR1P21757 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
MSR1P21757 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
MSR1P21757 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MSR1P21757 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
MSR1P21757 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MSR1P21757 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MSR1P21757 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MSR1P21757 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MSR1P21757 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.58□□□□□ -0.23
MSR1P21757 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
MSR1P21757 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
MSR1P21757 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MSR1P21757 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MSR1P21757 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.58□□□□□ -0.23
MSR1P21757 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.58□□□□□ -0.24
MSR1P21757 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
MSR1P21757 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.58□□□□□ -0.24
MSR1P21757 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.58□□□□□ -0.24
MSR1P21757 MEP1AP4-201ENST00000423244 1087 ntBASIC13.58□□□□□ -0.24
MSR1P21757 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.58□□□□□ -0.24
MSR1P21757 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.58□□□□□ -0.24
MSR1P21757 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.58□□□□□ -0.24
MSR1P21757 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.58□□□□□ -0.24
MSR1P21757 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.58□□□□□ -0.24
MSR1P21757 INGX-202ENST00000489074 768 ntBASIC13.58□□□□□ -0.24
MSR1P21757 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.58□□□□□ -0.24
MSR1P21757 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.58□□□□□ -0.24
MSR1P21757 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.58□□□□□ -0.24
MSR1P21757 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.58□□□□□ -0.24
MSR1P21757 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
MSR1P21757 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
MSR1P21757 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
MSR1P21757 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
MSR1P21757 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
MSR1P21757 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
MSR1P21757 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms