Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP4AP20648 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP4AP20648 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP4AP20648 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ATP4AP20648 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP4AP20648 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP4AP20648 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP4AP20648 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.96■□□□□ 0.3
ATP4AP20648 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.96■□□□□ 0.3
ATP4AP20648 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.96■□□□□ 0.3
ATP4AP20648 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP4AP20648 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.96■□□□□ 0.3
ATP4AP20648 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ATP4AP20648 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ATP4AP20648 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ATP4AP20648 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP4AP20648 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.96■□□□□ 0.3
ATP4AP20648 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP4AP20648 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP4AP20648 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 KRT8P44-201ENST00000441609 1350 ntBASIC16.95■□□□□ 0.3
ATP4AP20648 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ATP4AP20648 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP4AP20648 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 YBX1P6-201ENST00000442962 1002 ntBASIC16.95■□□□□ 0.3
ATP4AP20648 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ATP4AP20648 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.95■□□□□ 0.3
ATP4AP20648 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.95■□□□□ 0.3
ATP4AP20648 AP003171.2-201ENST00000528208 925 ntBASIC16.95■□□□□ 0.3
ATP4AP20648 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP4AP20648 AC023310.1-201ENST00000554836 735 ntBASIC16.95■□□□□ 0.3
ATP4AP20648 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.95■□□□□ 0.3
ATP4AP20648 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.95■□□□□ 0.3
ATP4AP20648 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP4AP20648 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.95■□□□□ 0.3
ATP4AP20648 AC010328.2-201ENST00000597698 1111 ntBASIC16.95■□□□□ 0.3
ATP4AP20648 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP4AP20648 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP4AP20648 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP4AP20648 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ATP4AP20648 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP4AP20648 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ATP4AP20648 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ATP4AP20648 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP4AP20648 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP4AP20648 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
ATP4AP20648 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP4AP20648 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP4AP20648 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ATP4AP20648 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATP4AP20648 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP4AP20648 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP4AP20648 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP4AP20648 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP4AP20648 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP4AP20648 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP4AP20648 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ATP4AP20648 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP4AP20648 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP4AP20648 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATP4AP20648 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP4AP20648 TPM3P8-201ENST00000330554 643 ntBASIC16.94■□□□□ 0.3
ATP4AP20648 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP4AP20648 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP4AP20648 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.94■□□□□ 0.3
ATP4AP20648 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.94■□□□□ 0.3
ATP4AP20648 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP4AP20648 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP4AP20648 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP4AP20648 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP4AP20648 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATP4AP20648 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ATP4AP20648 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP4AP20648 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATP4AP20648 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP4AP20648 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATP4AP20648 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ATP4AP20648 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.93■□□□□ 0.3
ATP4AP20648 TMBIM7P-203ENST00000641617 1718 ntBASIC16.93■□□□□ 0.3
ATP4AP20648 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.93■□□□□ 0.3
ATP4AP20648 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.93■□□□□ 0.3
ATP4AP20648 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP4AP20648 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.93■□□□□ 0.3
ATP4AP20648 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms