Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.33■□□□□ 0.05
CHRM3P20309 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHRM3P20309 AC023908.3-201ENST00000564211 3047 ntBASIC15.33■□□□□ 0.05
CHRM3P20309 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.33■□□□□ 0.05
CHRM3P20309 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHRM3P20309 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHRM3P20309 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHRM3P20309 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.33■□□□□ 0.04
CHRM3P20309 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.33■□□□□ 0.04
CHRM3P20309 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CHRM3P20309 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.33■□□□□ 0.04
CHRM3P20309 CYMP-203ENST00000474680 1263 ntBASIC15.33■□□□□ 0.04
CHRM3P20309 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.33■□□□□ 0.04
CHRM3P20309 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.33■□□□□ 0.04
CHRM3P20309 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CHRM3P20309 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.33■□□□□ 0.04
CHRM3P20309 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.33■□□□□ 0.04
CHRM3P20309 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.33■□□□□ 0.04
CHRM3P20309 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.33■□□□□ 0.04
CHRM3P20309 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.33■□□□□ 0.04
CHRM3P20309 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CHRM3P20309 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CHRM3P20309 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.33■□□□□ 0.04
CHRM3P20309 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.33■□□□□ 0.04
CHRM3P20309 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.33■□□□□ 0.04
CHRM3P20309 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CHRM3P20309 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CHRM3P20309 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.33■□□□□ 0.04
CHRM3P20309 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHRM3P20309 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.32■□□□□ 0.04
CHRM3P20309 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CHRM3P20309 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.32■□□□□ 0.04
CHRM3P20309 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.32■□□□□ 0.04
CHRM3P20309 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.32■□□□□ 0.04
CHRM3P20309 AL589987.1-201ENST00000453380 819 ntBASIC15.32■□□□□ 0.04
CHRM3P20309 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 SPDYE18-201ENST00000510091 1050 ntBASIC15.32■□□□□ 0.04
CHRM3P20309 RNA5SP421-201ENST00000516864 134 ntBASIC15.32■□□□□ 0.04
CHRM3P20309 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.32■□□□□ 0.04
CHRM3P20309 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.32■□□□□ 0.04
CHRM3P20309 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.32■□□□□ 0.04
CHRM3P20309 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.32■□□□□ 0.04
CHRM3P20309 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.32■□□□□ 0.04
CHRM3P20309 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CHRM3P20309 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRM3P20309 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.32■□□□□ 0.04
CHRM3P20309 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.32■□□□□ 0.04
CHRM3P20309 FAM45BP-202ENST00000592932 1624 ntBASIC15.32■□□□□ 0.04
CHRM3P20309 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHRM3P20309 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRM3P20309 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRM3P20309 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms