Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.84■□□□□ 0.29
ATF7P17544 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ATF7P17544 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.84■□□□□ 0.29
ATF7P17544 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.84■□□□□ 0.29
ATF7P17544 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ATF7P17544 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.84■□□□□ 0.29
ATF7P17544 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.84■□□□□ 0.29
ATF7P17544 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
ATF7P17544 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.84■□□□□ 0.29
ATF7P17544 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.84■□□□□ 0.29
ATF7P17544 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.84■□□□□ 0.29
ATF7P17544 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.84■□□□□ 0.29
ATF7P17544 AC073347.1-201ENST00000421633 2643 ntBASIC16.84■□□□□ 0.29
ATF7P17544 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ATF7P17544 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.84■□□□□ 0.29
ATF7P17544 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.84■□□□□ 0.29
ATF7P17544 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ATF7P17544 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.84■□□□□ 0.29
ATF7P17544 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF7P17544 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.84■□□□□ 0.29
ATF7P17544 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
ATF7P17544 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATF7P17544 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ATF7P17544 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATF7P17544 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.83■□□□□ 0.28
ATF7P17544 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATF7P17544 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.83■□□□□ 0.28
ATF7P17544 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.83■□□□□ 0.28
ATF7P17544 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATF7P17544 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.83■□□□□ 0.28
ATF7P17544 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
ATF7P17544 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATF7P17544 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.83■□□□□ 0.28
ATF7P17544 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ATF7P17544 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.83■□□□□ 0.28
ATF7P17544 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATF7P17544 AL138799.1-201ENST00000448213 1675 ntBASIC16.83■□□□□ 0.28
ATF7P17544 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.83■□□□□ 0.28
ATF7P17544 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.83■□□□□ 0.28
ATF7P17544 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.83■□□□□ 0.28
ATF7P17544 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATF7P17544 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.83■□□□□ 0.28
ATF7P17544 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.83■□□□□ 0.28
ATF7P17544 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF7P17544 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
ATF7P17544 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATF7P17544 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATF7P17544 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATF7P17544 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.82■□□□□ 0.28
ATF7P17544 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATF7P17544 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATF7P17544 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATF7P17544 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATF7P17544 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.82■□□□□ 0.28
ATF7P17544 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATF7P17544 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATF7P17544 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATF7P17544 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATF7P17544 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
ATF7P17544 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms