Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPN1P07384 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CAPN1P07384 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CAPN1P07384 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CAPN1P07384 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 SPDYE19P-201ENST00000338590 713 ntBASIC15.17■□□□□ 0.02
CAPN1P07384 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.17■□□□□ 0.02
CAPN1P07384 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.17■□□□□ 0.02
CAPN1P07384 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 DFFBP1-201ENST00000433250 979 ntBASIC15.17■□□□□ 0.02
CAPN1P07384 TARDBPP1-201ENST00000442013 1203 ntBASIC15.17■□□□□ 0.02
CAPN1P07384 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 DOC2GP-202ENST00000514950 1163 ntBASIC15.17■□□□□ 0.02
CAPN1P07384 SDHAP3-202ENST00000515467 728 ntBASIC15.17■□□□□ 0.02
CAPN1P07384 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 SRD5A3P1-201ENST00000603021 949 ntBASIC15.17■□□□□ 0.02
CAPN1P07384 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPN1P07384 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CAPN1P07384 AC004461.2-201ENST00000629517 803 ntBASIC15.17■□□□□ 0.02
CAPN1P07384 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPN1P07384 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CAPN1P07384 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN1P07384 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 AC106881.1-201ENST00000605849 3329 ntBASIC15.17■□□□□ 0.02
CAPN1P07384 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN1P07384 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPN1P07384 LINC00528-201ENST00000600723 2160 ntBASIC15.17■□□□□ 0.02
CAPN1P07384 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN1P07384 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN1P07384 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN1P07384 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.16■□□□□ 0.02
CAPN1P07384 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CAPN1P07384 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 AC084364.1-201ENST00000551967 1556 ntBASIC15.16■□□□□ 0.02
CAPN1P07384 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CAPN1P07384 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN1P07384 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.16■□□□□ 0.02
CAPN1P07384 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.16■□□□□ 0.02
CAPN1P07384 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN1P07384 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN1P07384 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.16■□□□□ 0.02
CAPN1P07384 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CAPN1P07384 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms