Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 AC138969.3-201ENST00000546612 1459 ntBASIC11.72□□□□□ -0.53
TCRAP04437 AC138932.2-201ENST00000548268 1459 ntBASIC11.72□□□□□ -0.53
TCRAP04437 AC126755.4-201ENST00000549796 1459 ntBASIC11.72□□□□□ -0.53
TCRAP04437 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.72□□□□□ -0.53
TCRAP04437 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
TCRAP04437 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.72□□□□□ -0.53
TCRAP04437 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
TCRAP04437 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.72□□□□□ -0.53
TCRAP04437 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
TCRAP04437 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.72□□□□□ -0.53
TCRAP04437 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.72□□□□□ -0.53
TCRAP04437 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.72□□□□□ -0.53
TCRAP04437 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC11.72□□□□□ -0.53
TCRAP04437 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.72□□□□□ -0.53
TCRAP04437 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
TCRAP04437 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
TCRAP04437 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
TCRAP04437 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.72□□□□□ -0.53
TCRAP04437 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.72□□□□□ -0.53
TCRAP04437 AC152010.1-201ENST00000415779 2006 ntBASIC11.72□□□□□ -0.53
TCRAP04437 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
TCRAP04437 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
TCRAP04437 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
TCRAP04437 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRAP04437 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TCRAP04437 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.71□□□□□ -0.53
TCRAP04437 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.71□□□□□ -0.53
TCRAP04437 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
TCRAP04437 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.71□□□□□ -0.53
TCRAP04437 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
TCRAP04437 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 AC015802.1-201ENST00000588104 1449 ntBASIC11.71□□□□□ -0.53
TCRAP04437 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.53
TCRAP04437 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
TCRAP04437 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.71□□□□□ -0.53
TCRAP04437 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.71□□□□□ -0.53
TCRAP04437 REXO1L4P-201ENST00000605109 1937 ntBASIC11.71□□□□□ -0.53
TCRAP04437 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 AC004870.1-201ENST00000315132 882 ntBASIC11.71□□□□□ -0.53
TCRAP04437 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.53
TCRAP04437 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.71□□□□□ -0.53
TCRAP04437 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
TCRAP04437 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
TCRAP04437 FAAHP1-202ENST00000446499 1238 ntBASIC11.71□□□□□ -0.53
TCRAP04437 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.71□□□□□ -0.53
TCRAP04437 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.71□□□□□ -0.53
TCRAP04437 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 AL513190.1-201ENST00000621254 727 ntBASIC11.71□□□□□ -0.53
TCRAP04437 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRAP04437 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.71□□□□□ -0.53
TCRAP04437 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
TCRAP04437 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TCRAP04437 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TCRAP04437 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TCRAP04437 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRAP04437 AL359881.3-201ENST00000602640 1721 ntBASIC11.71□□□□□ -0.54
TCRAP04437 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRAP04437 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.71□□□□□ -0.54
TCRAP04437 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRAP04437 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.71□□□□□ -0.54
TCRAP04437 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRAP04437 AC007787.1-201ENST00000588095 1583 ntBASIC11.71□□□□□ -0.54
TCRAP04437 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
TCRAP04437 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms