Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.92□□□□□ -0.34
CD74P04233 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CD74P04233 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CD74P04233 MIR346-201ENST00000362234 95 ntBASIC12.92□□□□□ -0.34
CD74P04233 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.92□□□□□ -0.34
CD74P04233 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CD74P04233 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CD74P04233 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
CD74P04233 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.92□□□□□ -0.34
CD74P04233 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.92□□□□□ -0.34
CD74P04233 RNA5SP415-201ENST00000517246 115 ntBASIC12.92□□□□□ -0.34
CD74P04233 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.92□□□□□ -0.34
CD74P04233 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.92□□□□□ -0.34
CD74P04233 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.92□□□□□ -0.34
CD74P04233 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.92□□□□□ -0.34
CD74P04233 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.92□□□□□ -0.34
CD74P04233 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.92□□□□□ -0.34
CD74P04233 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.92□□□□□ -0.34
CD74P04233 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CD74P04233 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CD74P04233 AC099521.3-201ENST00000624251 2938 ntBASIC12.92□□□□□ -0.34
CD74P04233 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
CD74P04233 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.92□□□□□ -0.34
CD74P04233 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.92□□□□□ -0.34
CD74P04233 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CD74P04233 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.92□□□□□ -0.34
CD74P04233 LILRP1-201ENST00000444199 1370 ntBASIC12.92□□□□□ -0.34
CD74P04233 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 AL356585.2-201ENST00000625078 2396 ntBASIC12.92□□□□□ -0.34
CD74P04233 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD74P04233 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CD74P04233 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.91□□□□□ -0.34
CD74P04233 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.91□□□□□ -0.34
CD74P04233 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CD74P04233 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CD74P04233 AC016397.2-201ENST00000624848 1985 ntBASIC12.91□□□□□ -0.34
CD74P04233 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 PTENP1-202ENST00000532280 3996 ntBASIC12.91□□□□□ -0.34
CD74P04233 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CD74P04233 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CD74P04233 FO393414.2-201ENST00000405153 598 ntBASIC12.91□□□□□ -0.34
CD74P04233 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.91□□□□□ -0.34
CD74P04233 AC074386.1-202ENST00000463561 864 ntBASIC12.91□□□□□ -0.34
CD74P04233 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.91□□□□□ -0.34
CD74P04233 TMEM198B-204ENST00000484016 896 ntBASIC12.91□□□□□ -0.34
CD74P04233 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.91□□□□□ -0.34
CD74P04233 AC079776.4-201ENST00000511039 504 ntBASIC12.91□□□□□ -0.34
CD74P04233 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 KRT126P-201ENST00000549467 1181 ntBASIC12.91□□□□□ -0.34
CD74P04233 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.91□□□□□ -0.34
CD74P04233 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.91□□□□□ -0.34
CD74P04233 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.91□□□□□ -0.34
CD74P04233 AL049840.3-201ENST00000602669 611 ntBASIC12.91□□□□□ -0.34
CD74P04233 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.91□□□□□ -0.34
CD74P04233 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.91□□□□□ -0.34
CD74P04233 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms