Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC15.18■□□□□ 0.02
PDGFBP01127 CHCHD2P9-201ENST00000461726 456 ntBASIC15.18■□□□□ 0.02
PDGFBP01127 RN7SL396P-201ENST00000471086 295 ntBASIC15.18■□□□□ 0.02
PDGFBP01127 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC15.18■□□□□ 0.02
PDGFBP01127 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.18■□□□□ 0.02
PDGFBP01127 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PDGFBP01127 PHBP15-201ENST00000574228 665 ntBASIC15.18■□□□□ 0.02
PDGFBP01127 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.18■□□□□ 0.02
PDGFBP01127 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.18■□□□□ 0.02
PDGFBP01127 AC011247.3-201ENST00000603297 438 ntBASIC15.18■□□□□ 0.02
PDGFBP01127 AC087392.5-201ENST00000612517 489 ntBASIC15.18■□□□□ 0.02
PDGFBP01127 LINC01783-202ENST00000614408 828 ntBASIC15.18■□□□□ 0.02
PDGFBP01127 BX284668.2-205ENST00000619677 828 ntBASIC15.18■□□□□ 0.02
PDGFBP01127 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC15.18■□□□□ 0.02
PDGFBP01127 AC090502.4-201ENST00000551714 1386 ntBASIC15.18■□□□□ 0.02
PDGFBP01127 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 AC084364.1-201ENST00000551967 1556 ntBASIC15.18■□□□□ 0.02
PDGFBP01127 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.18■□□□□ 0.02
PDGFBP01127 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PDGFBP01127 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PDGFBP01127 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.18■□□□□ 0.02
PDGFBP01127 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.18■□□□□ 0.02
PDGFBP01127 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PDGFBP01127 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PDGFBP01127 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PDGFBP01127 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PDGFBP01127 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PDGFBP01127 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PDGFBP01127 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PDGFBP01127 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFBP01127 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFBP01127 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 AL357563.1-201ENST00000404728 395 ntBASIC15.17■□□□□ 0.02
PDGFBP01127 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.17■□□□□ 0.02
PDGFBP01127 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.17■□□□□ 0.02
PDGFBP01127 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFBP01127 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.17■□□□□ 0.02
PDGFBP01127 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.17■□□□□ 0.02
PDGFBP01127 AC012158.2-201ENST00000536546 354 ntBASIC15.17■□□□□ 0.02
PDGFBP01127 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.17■□□□□ 0.02
PDGFBP01127 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PDGFBP01127 SIGLEC18P-201ENST00000602271 909 ntBASIC15.17■□□□□ 0.02
PDGFBP01127 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.17■□□□□ 0.02
PDGFBP01127 AC244250.3-201ENST00000620749 366 ntBASIC15.17■□□□□ 0.02
PDGFBP01127 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PDGFBP01127 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFBP01127 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFBP01127 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 AL157414.3-201ENST00000624276 1954 ntBASIC15.16■□□□□ 0.02
PDGFBP01127 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
PDGFBP01127 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDGFBP01127 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
PDGFBP01127 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFBP01127 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFBP01127 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFBP01127 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.16■□□□□ 0.02
PDGFBP01127 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PDGFBP01127 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.16■□□□□ 0.02
PDGFBP01127 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.16■□□□□ 0.02
PDGFBP01127 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.16■□□□□ 0.02
PDGFBP01127 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFBP01127 AC024293.1-201ENST00000467930 498 ntBASIC15.16■□□□□ 0.02
PDGFBP01127 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
PDGFBP01127 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
PDGFBP01127 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PDGFBP01127 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms