Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMC2O95347 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.42■□□□□ 0.38
SMC2O95347 Z97205.2-201ENST00000564697 1639 ntBASIC17.42■□□□□ 0.38
SMC2O95347 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC17.42■□□□□ 0.38
SMC2O95347 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMC2O95347 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMC2O95347 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMC2O95347 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMC2O95347 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SMC2O95347 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.42■□□□□ 0.38
SMC2O95347 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMC2O95347 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.41■□□□□ 0.38
SMC2O95347 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.41■□□□□ 0.38
SMC2O95347 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
SMC2O95347 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.41■□□□□ 0.38
SMC2O95347 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
SMC2O95347 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.41■□□□□ 0.38
SMC2O95347 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.41■□□□□ 0.38
SMC2O95347 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.41■□□□□ 0.38
SMC2O95347 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SMC2O95347 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SMC2O95347 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.41■□□□□ 0.38
SMC2O95347 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.41■□□□□ 0.38
SMC2O95347 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 AL512356.2-201ENST00000546955 174 ntBASIC17.41■□□□□ 0.38
SMC2O95347 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.41■□□□□ 0.38
SMC2O95347 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.41■□□□□ 0.38
SMC2O95347 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 AC011467.4-201ENST00000594891 528 ntBASIC17.41■□□□□ 0.38
SMC2O95347 AL033527.5-202ENST00000641632 1098 ntBASIC17.41■□□□□ 0.38
SMC2O95347 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
SMC2O95347 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
SMC2O95347 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SMC2O95347 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.41■□□□□ 0.38
SMC2O95347 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.41■□□□□ 0.38
SMC2O95347 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SMC2O95347 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.41■□□□□ 0.38
SMC2O95347 AC140479.7-201ENST00000636301 2332 ntBASIC17.41■□□□□ 0.38
SMC2O95347 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMC2O95347 CICP14-201ENST00000629111 2732 ntBASIC17.41■□□□□ 0.38
SMC2O95347 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SMC2O95347 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
SMC2O95347 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.4■□□□□ 0.38
SMC2O95347 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SMC2O95347 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMC2O95347 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.4■□□□□ 0.38
SMC2O95347 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SMC2O95347 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.4■□□□□ 0.38
SMC2O95347 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 AL133267.1-201ENST00000398220 340 ntBASIC17.4■□□□□ 0.38
SMC2O95347 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 AL080243.2-201ENST00000418783 582 ntBASIC17.4■□□□□ 0.38
SMC2O95347 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.4■□□□□ 0.38
SMC2O95347 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.4■□□□□ 0.38
SMC2O95347 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.4■□□□□ 0.38
SMC2O95347 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SMC2O95347 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
SMC2O95347 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SMC2O95347 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SMC2O95347 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMC2O95347 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMC2O95347 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms