Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.77□□□□□ -0.21
CDRT1O95170 Z83851.2-201ENST00000609564 659 ntBASIC13.77□□□□□ -0.21
CDRT1O95170 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDRT1O95170 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDRT1O95170 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CDRT1O95170 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDRT1O95170 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDRT1O95170 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDRT1O95170 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDRT1O95170 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDRT1O95170 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDRT1O95170 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDRT1O95170 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CDRT1O95170 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDRT1O95170 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.76□□□□□ -0.21
CDRT1O95170 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.76□□□□□ -0.21
CDRT1O95170 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.76□□□□□ -0.21
CDRT1O95170 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.76□□□□□ -0.21
CDRT1O95170 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.76□□□□□ -0.21
CDRT1O95170 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDRT1O95170 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.76□□□□□ -0.21
CDRT1O95170 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.76□□□□□ -0.21
CDRT1O95170 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CDRT1O95170 AL450487.1-201ENST00000426799 995 ntBASIC13.76□□□□□ -0.21
CDRT1O95170 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.76□□□□□ -0.21
CDRT1O95170 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.76□□□□□ -0.21
CDRT1O95170 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.76□□□□□ -0.21
CDRT1O95170 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.76□□□□□ -0.21
CDRT1O95170 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CDRT1O95170 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.76□□□□□ -0.21
CDRT1O95170 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDRT1O95170 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.76□□□□□ -0.21
CDRT1O95170 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.76□□□□□ -0.21
CDRT1O95170 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.76□□□□□ -0.21
CDRT1O95170 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CDRT1O95170 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDRT1O95170 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.76□□□□□ -0.21
CDRT1O95170 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.76□□□□□ -0.21
CDRT1O95170 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.75□□□□□ -0.21
CDRT1O95170 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CDRT1O95170 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.75□□□□□ -0.21
CDRT1O95170 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CDRT1O95170 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CDRT1O95170 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
CDRT1O95170 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.75□□□□□ -0.21
CDRT1O95170 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.75□□□□□ -0.21
CDRT1O95170 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.75□□□□□ -0.21
CDRT1O95170 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.75□□□□□ -0.21
CDRT1O95170 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CDRT1O95170 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CDRT1O95170 RPL5P21-201ENST00000404620 815 ntBASIC13.75□□□□□ -0.21
CDRT1O95170 AC079776.4-201ENST00000511039 504 ntBASIC13.75□□□□□ -0.21
CDRT1O95170 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.75□□□□□ -0.21
CDRT1O95170 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.75□□□□□ -0.21
CDRT1O95170 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.75□□□□□ -0.21
CDRT1O95170 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.75□□□□□ -0.21
CDRT1O95170 KRT19P2-202ENST00000557173 1012 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms