Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.09■□□□□ 0.33
CLSTN1O94985 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLSTN1O94985 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.09■□□□□ 0.33
CLSTN1O94985 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.09■□□□□ 0.33
CLSTN1O94985 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.09■□□□□ 0.33
CLSTN1O94985 FO393414.2-201ENST00000405153 598 ntBASIC17.09■□□□□ 0.33
CLSTN1O94985 SPDYE17-201ENST00000412399 783 ntBASIC17.09■□□□□ 0.33
CLSTN1O94985 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLSTN1O94985 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.09■□□□□ 0.33
CLSTN1O94985 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.09■□□□□ 0.33
CLSTN1O94985 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.09■□□□□ 0.33
CLSTN1O94985 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.09■□□□□ 0.33
CLSTN1O94985 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.09■□□□□ 0.33
CLSTN1O94985 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.09■□□□□ 0.33
CLSTN1O94985 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.09■□□□□ 0.33
CLSTN1O94985 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 AL390955.2-201ENST00000603032 514 ntBASIC17.09■□□□□ 0.33
CLSTN1O94985 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.09■□□□□ 0.33
CLSTN1O94985 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLSTN1O94985 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLSTN1O94985 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.09■□□□□ 0.33
CLSTN1O94985 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.09■□□□□ 0.33
CLSTN1O94985 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.09■□□□□ 0.33
CLSTN1O94985 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 AL109954.1-202ENST00000564051 2148 ntBASIC17.09■□□□□ 0.33
CLSTN1O94985 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLSTN1O94985 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.09■□□□□ 0.33
CLSTN1O94985 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLSTN1O94985 AC126335.2-201ENST00000623362 4637 ntBASIC17.08■□□□□ 0.33
CLSTN1O94985 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLSTN1O94985 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
CLSTN1O94985 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLSTN1O94985 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLSTN1O94985 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.08■□□□□ 0.33
CLSTN1O94985 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLSTN1O94985 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLSTN1O94985 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLSTN1O94985 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLSTN1O94985 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.08■□□□□ 0.32
CLSTN1O94985 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CLSTN1O94985 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLSTN1O94985 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.08■□□□□ 0.32
CLSTN1O94985 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLSTN1O94985 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLSTN1O94985 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLSTN1O94985 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLSTN1O94985 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLSTN1O94985 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLSTN1O94985 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.08■□□□□ 0.32
CLSTN1O94985 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.08■□□□□ 0.32
CLSTN1O94985 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CLSTN1O94985 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.08■□□□□ 0.32
CLSTN1O94985 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.08■□□□□ 0.32
CLSTN1O94985 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.08■□□□□ 0.32
CLSTN1O94985 AC044860.1-202ENST00000559481 777 ntBASIC17.08■□□□□ 0.32
CLSTN1O94985 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.08■□□□□ 0.32
CLSTN1O94985 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CLSTN1O94985 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.08■□□□□ 0.32
CLSTN1O94985 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CLSTN1O94985 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.08■□□□□ 0.32
CLSTN1O94985 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLSTN1O94985 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLSTN1O94985 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CLSTN1O94985 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLSTN1O94985 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.08■□□□□ 0.32
CLSTN1O94985 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLSTN1O94985 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CLSTN1O94985 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLSTN1O94985 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLSTN1O94985 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.08■□□□□ 0.32
CLSTN1O94985 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CLSTN1O94985 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLSTN1O94985 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLSTN1O94985 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 LINC01101-201ENST00000622953 1884 ntBASIC17.07■□□□□ 0.32
CLSTN1O94985 AC007292.2-201ENST00000593524 1812 ntBASIC17.07■□□□□ 0.32
CLSTN1O94985 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms