Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 FAM8A3P-201ENST00000427218 844 ntBASIC12.38□□□□□ -0.43
SRRM4A7MD48 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 AC004890.2-204ENST00000481968 304 ntBASIC12.38□□□□□ -0.43
SRRM4A7MD48 MEIS3P1-201ENST00000495167 958 ntBASIC12.38□□□□□ -0.43
SRRM4A7MD48 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 AL391069.4-201ENST00000609583 481 ntBASIC12.38□□□□□ -0.43
SRRM4A7MD48 AC008738.7-201ENST00000609744 511 ntBASIC12.38□□□□□ -0.43
SRRM4A7MD48 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 AL390754.1-201ENST00000619088 582 ntBASIC12.38□□□□□ -0.43
SRRM4A7MD48 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 AC004840.1-201ENST00000636359 365 ntBASIC12.38□□□□□ -0.43
SRRM4A7MD48 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 CLK3P2-201ENST00000427566 1453 ntBASIC12.38□□□□□ -0.43
SRRM4A7MD48 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
SRRM4A7MD48 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SRRM4A7MD48 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 SRD5A3P1-201ENST00000603021 949 ntBASIC12.37□□□□□ -0.43
SRRM4A7MD48 AL390955.2-201ENST00000603032 514 ntBASIC12.37□□□□□ -0.43
SRRM4A7MD48 AC093512.1-201ENST00000617969 520 ntBASIC12.37□□□□□ -0.43
SRRM4A7MD48 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 AL158212.4-201ENST00000624062 1286 ntBASIC12.37□□□□□ -0.43
SRRM4A7MD48 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms