Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.24■□□□□ 0.03
TBC1D3FA6NER0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 FAM8A4P-201ENST00000435433 1213 ntBASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 GOLGA2P4-201ENST00000441462 777 ntBASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 AC099548.2-209ENST00000480264 625 ntBASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 AC105250.1-201ENST00000509378 2057 ntBASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TBC1D3FA6NER0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 AL133338.1-201ENST00000565695 1517 ntBASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 AC092850.2-201ENST00000623821 2697 ntBASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 AC103810.3-201ENST00000583567 96 ntBASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TBC1D3FA6NER0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms