Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 AC004987.2-201ENST00000395959 1148 ntBASIC16.75■□□□□ 0.27
CCDC66A2RUB6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 AL022342.1-201ENST00000400363 863 ntBASIC16.75■□□□□ 0.27
CCDC66A2RUB6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 RNA5SP416-201ENST00000516838 111 ntBASIC16.75■□□□□ 0.27
CCDC66A2RUB6 SLC25A1P1-201ENST00000528351 927 ntBASIC16.75■□□□□ 0.27
CCDC66A2RUB6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 AC008267.7-201ENST00000624570 1194 ntBASIC16.75■□□□□ 0.27
CCDC66A2RUB6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC66A2RUB6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 AC018892.3-201ENST00000623986 2499 ntBASIC16.74■□□□□ 0.27
CCDC66A2RUB6 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 AP000347.1-202ENST00000435868 847 ntBASIC16.74■□□□□ 0.27
CCDC66A2RUB6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 ZNF259P1-201ENST00000407656 1365 ntBASIC16.74■□□□□ 0.27
CCDC66A2RUB6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC66A2RUB6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms