Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AC012617.1-204ENST00000586340 2305 ntBASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 AC068587.6-202ENST00000641839 5619 ntBASIC13.37□□□□□ -0.27
SHISA3A0PJX4 CICP16-201ENST00000502609 2813 ntBASIC13.37□□□□□ -0.27
SHISA3A0PJX4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 AL671277.1-201ENST00000429656 993 ntBASIC13.37□□□□□ -0.27
SHISA3A0PJX4 ADH5P3-201ENST00000433842 1137 ntBASIC13.37□□□□□ -0.27
SHISA3A0PJX4 SPCS2P4-201ENST00000436160 681 ntBASIC13.37□□□□□ -0.27
SHISA3A0PJX4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 AC244517.3-201ENST00000616254 1235 ntBASIC13.37□□□□□ -0.27
SHISA3A0PJX4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 AL356585.2-201ENST00000625078 2396 ntBASIC13.37□□□□□ -0.27
SHISA3A0PJX4 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SHISA3A0PJX4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 MYO15B-237ENST00000642007 4893 ntBASIC13.36□□□□□ -0.27
SHISA3A0PJX4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 PTENP1-202ENST00000532280 3996 ntBASIC13.36□□□□□ -0.27
SHISA3A0PJX4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms