Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 AL512625.2-201ENST00000417533 625 ntBASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 STK19B-204ENST00000512515 211 ntBASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 PRKY-204ENST00000533551 1019 ntBASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 AC092118.2-201ENST00000613495 667 ntBASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 AC010503.4-201ENST00000615487 688 ntBASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 SPTSSB-204ENST00000617024 1292 ntBASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 BX537318.2-201ENST00000624893 4162 ntBASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 AC125807.2-201ENST00000513358 3514 ntBASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 AP001282.1-201ENST00000531301 1499 ntBASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LINC01558Q9Y6Z2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms